Co-expression analysis

Gene ID 1609986_at
Gene name hypothetical protein LOC100261396
Homology with ArabidopsisSimilar to At4g05130: equilibrative nucleoside transporter, putative (ENT4) (HF=6e-2)
Module size 6 genes
NF 0.36
%ile 52.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6787.90.931609986_atCB349859hypothetical protein LOC100261396-6e-2At4g05130equilibrative nucleoside transporter, putative (ENT4)O.I.H.G.S.X.
0.4464.10.951618478_atCF515277hypothetical protein LOC100259390-4e-3At2g34850MEE25 (maternal effect embryo arrest 25)O.I.H.G.S.X.
0.4057.70.931609253_atCB974058--4e+0At3g30160unknown proteinO.I.H.G.S.X.
0.2734.00.921622456_atCF609276hypothetical protein LOC100245907 /// hypothetical protein LOC100265993-2e-1At5g65870ATPSK5 (PHYTOSULFOKINE 5 PRECURSOR)O.I.H.G.S.X.
0.2530.50.931610013_s_atCF213272hypothetical protein LOC100259835-6e-6At2g26530AR781O.I.H.G.S.X.
0.2530.50.931612186_atCD800937hypothetical protein LOC100241494-1e+1At5g18250unknown proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
7.599.2GSM299456C_i_rep1GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
7.399.2GSM299459D_i_rep1GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
6.198.7GSM299457C_i_rep2GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
6.098.7GSM299460D_i_rep2GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
6.098.7GSM299453B_i_rep1GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
4.297.1GSM299454B_i_rep2GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
4.297.1GSM299461C_ni_rep1GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
3.796.2GSM287897Red soft berry C29 from plant 2 cluster proximal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO
3.696.0GSM287901Red soft berry C16 from plant 1 cluster distal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initationLink to GEO
3.696.0GSM287873Green hard berry B9 from plant 2 cluster proximal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO

Inter-species module comparison

A co-expression module including the rice gene, Os07g0557200, orthologous to the query gene, 1609986_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.5676.3Os07g0557200At4g05130-Delayed-early response protein/equilibrativenucleoside transporter family protein8e-5At4g05120FUR1 (FUDR RESISTANT 1)O.I.H.G.S.X.
0.7189.6Os09g0255000At4g05130-Cell wall invertase (EC 3.2.1.26)4e+0At5g4004060S acidic ribosomal protein P2 (RPP2E)O.I.H.G.S.X.
0.5573.7Os09g0461700At4g05130-Esterase/lipase/thioesterase domain containingprotein2e-1At5g16080AtCXE17 (Arabidopsis thaliana carboxyesterase 17)O.I.H.G.S.X.
0.3541.7Os03g0854600At4g05130-Glycoside hydrolase, family 16 domain containingprotein7e-1At3g50820PSBO2 (PHOTOSYSTEM II SUBUNIT O-2)O.I.H.G.S.X.
0.3338.8Os06g0534800At4g05130-Ankyrin repeat containing protein3e+0At5g23100unknown proteinO.I.H.G.S.X.
0.2524.1Os09g0403000At4g05130-Conserved hypothetical protein1e-1At1g76500SOB3 (SUPPRESSOR OF PHYB-4#3)O.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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