Co-expression analysis

Gene ID 1609986_at
Gene name hypothetical protein LOC100261396
Homology with ArabidopsisSimilar to At4g05130: equilibrative nucleoside transporter, putative (ENT4) (HF=6e-2)
Module size 6 genes
NF 0.36
%ile 52.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6787.90.931609986_atCB349859hypothetical protein LOC100261396-6e-2At4g05130equilibrative nucleoside transporter, putative (ENT4)O.I.H.G.S.X.
0.4464.10.951618478_atCF515277hypothetical protein LOC100259390-4e-3At2g34850MEE25 (maternal effect embryo arrest 25)O.I.H.G.S.X.
0.4057.70.931609253_atCB974058--4e+0At3g30160unknown proteinO.I.H.G.S.X.
0.2734.00.921622456_atCF609276hypothetical protein LOC100245907 /// hypothetical protein LOC100265993-2e-1At5g65870ATPSK5 (PHYTOSULFOKINE 5 PRECURSOR)O.I.H.G.S.X.
0.2530.50.931610013_s_atCF213272hypothetical protein LOC100259835-6e-6At2g26530AR781O.I.H.G.S.X.
0.2530.50.931612186_atCD800937hypothetical protein LOC100241494-1e+1At5g18250unknown proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
7.599.2GSM299456C_i_rep1GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
7.399.2GSM299459D_i_rep1GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
6.198.7GSM299457C_i_rep2GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
6.098.7GSM299460D_i_rep2GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
6.098.7GSM299453B_i_rep1GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
4.297.1GSM299454B_i_rep2GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
4.297.1GSM299461C_ni_rep1GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
3.796.2GSM287897Red soft berry C29 from plant 2 cluster proximal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO
3.696.0GSM287901Red soft berry C16 from plant 1 cluster distal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initationLink to GEO
3.696.0GSM287873Green hard berry B9 from plant 2 cluster proximal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO

Inter-species module comparison

A co-expression module including the soybean gene, GmaAffx.36878.1.S1_at, orthologous to the query gene, 1609986_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.4665.5GmaAffx.36878.1.S1_atAt4g05130--7e-4At4g05130equilibrative nucleoside transporter, putative (ENT4)O.I.H.G.S.X.
0.4665.5Gma.5605.1.S1_atAt4g05130--2e-13At3g02210COBL1 (COBRA-LIKE PROTEIN 1 PRECURSOR)O.I.H.G.S.X.
0.1923.7Gma.1458.1.S1_atAt4g05130--6e-42At1g76160sks5 (SKU5 Similar 5)O.I.H.G.S.X.
0.1215.1Gma.10796.2.S1_x_atAt4g05130--0At5g05170CEV1 (CONSTITUTIVE EXPRESSION OF VSP 1)O.I.H.G.S.X.
0.1114.2GmaAffx.85140.1.S1_atAt4g05130--3e-44At5g60920COB (COBRA)O.I.H.G.S.X.
0.058.0GmaAffx.35303.1.S1_atAt4g05130--1e-3At4g05130equilibrative nucleoside transporter, putative (ENT4)O.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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