Co-expression analysis

Gene ID	1609942_at
Gene name	hypothetical protein LOC100262467
Homology with Arabidopsis	Similar to At5g67580: TRB2 (HF=5e+0)
Module size	6 genes
NF	0.67
%ile	92.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.8	0.98	1609942_at	CF210968	hypothetical protein LOC100262467	-	5e+0	At5g67580	TRB2	O.I.	H.G.	S.X.	Please select
0.71	89.5	0.98	1615411_s_at	BQ799375	hypothetical protein LOC100266324	-	3e-4	At1g43130	LCV2 (LIKE COV 2)	O.I.	H.G.	S.X.	Please select
0.67	87.9	0.98	1613621_s_at	CD721086	hypothetical protein LOC100246359	-	3e-1	At5g58412	-	O.I.	H.G.	S.X.	Please select
0.67	87.9	0.99	1606807_at	BQ794559	hypothetical protein LOC100264697	-	7e-21	At5g11710	epsin N-terminal homology (ENTH) domain-containing protein / clathrin assembly protein-related	O.I.	H.G.	S.X.	Please select
0.50	72.7	0.98	1611974_at	CF208396	hypothetical protein LOC100258926	-	9e-27	At2g15430	NRPB3	O.I.	H.G.	S.X.	Please select
0.48	68.8	0.98	1608155_at	CF210980	hypothetical protein LOC100252195	-	1e-31	At4g34460	AGB1 (GTP BINDING PROTEIN BETA 1)	O.I.	H.G.	S.X.	Please select

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Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
4.2	97.1	GSM147732	Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation	61
4.0	96.7	GSM436349	Seyval (SV, Seyve Villard 5-276) LD, 15h 3 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
3.5	95.7	GSM436347	Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.8	93.4	GSM147708	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation	37
2.5	91.9	GSM436394	V. riparia (VR, PI588259) LD, 15h 7 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.4	91.3	GSM436348	Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.3	90.7	GSM147714	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation	43
2.3	90.7	GSM436396	V. riparia (VR, PI588259) LD, 15h 7 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.3	90.7	GSM436351	Seyval (SV, Seyve Villard 5-276) LD, 15h 3 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.2	89.9	GSM436390	V. riparia (VR, PI588259) LD, 15h 1 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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