Co-expression analysis

Gene ID 1609929_at
Gene name hypothetical protein LOC100259947
Homology with ArabidopsisSimilar to At5g02440: unknown protein (HF=3e+0)
Module size 7 genes
NF 0.24
%ile 34.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6787.90.941609929_atCB346194hypothetical protein LOC100259947-3e+0At5g02440unknown proteinO.I.H.G.S.X.
0.5577.30.941621919_atCF404571hypothetical protein LOC100247550-2e-8At4g12780heat shock protein bindingO.I.H.G.S.X.
0.3650.70.951617373_s_atCA816697hypothetical protein LOC100245878-5e-6At5g23570SGS3 (SUPPRESSOR OF GENE SILENCING 3)O.I.H.G.S.X.
0.3345.70.931616537_atCF212796hypothetical protein LOC100244754-3e-1At3g4502050S ribosomal protein-relatedO.I.H.G.S.X.
0.1515.60.931609037_atCB342383--4e-3At5g08350GRAM domain-containing protein / ABA-responsive protein-relatedO.I.H.G.S.X.
0.1313.30.941617923_atCB977646--4e+0At5g52570BETA-OHASE 2 (BETA-CAROTENE HYDROXYLASE 2)O.I.H.G.S.X.
0.1212.10.941611443_atCA818502--9e-1At1g77885unknown proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
4.697.6GSM147735Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation64Link to GEO
4.397.2GSM436351Seyval (SV, Seyve Villard 5-276) LD, 15h 3 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
3.996.6GSM436348Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
3.595.7GSM147720Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation49Link to GEO
3.595.7GSM147723Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation52Link to GEO
3.495.5GSM147722Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation51Link to GEO
3.495.5GSM147717Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation46Link to GEO
3.194.6GSM147739Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation68Link to GEO
2.893.4GSM436350Seyval (SV, Seyve Villard 5-276) LD, 15h 3 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.893.4GSM147716Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation45Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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