Co-expression analysis

Gene ID	1609920_at
Gene name	hypothetical protein LOC100264144
Homology with Arabidopsis	Similar to At5g19820: emb2734 (embryo defective 2734) (HF=4e-30)
Module size	7 genes
NF	0.40
%ile	59.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.52	73.9	0.96	1609920_at	CD711951	hypothetical protein LOC100264144	-	4e-30	At5g19820	emb2734 (embryo defective 2734)	O.I.	H.G.	S.X.	Please select
0.46	66.5	0.98	1615684_at	CF604666	hypothetical protein LOC100244706	-	1e-38	At1g67170	unknown protein	O.I.	H.G.	S.X.	Please select
0.43	61.5	0.97	1610495_at	CB980163	hypothetical protein LOC100244069	-	8e-20	At3g25800	PP2AA2 (PROTEIN PHOSPHATASE 2A SUBUNIT A2)	O.I.	H.G.	S.X.	Please select
0.36	50.7	0.98	1613249_at	CF210498	hypothetical protein LOC100251410	-	2e-36	At3g14450	CID9 (CTC-Interacting Domain 9)	O.I.	H.G.	S.X.	Please select
0.33	45.7	0.98	1617274_at	CF372628	hypothetical protein LOC100261092	-	3e-11	At5g11580	UVB-resistance protein-related / regulator of chromosome condensation (RCC1) family protein	O.I.	H.G.	S.X.	Please select
0.32	43.1	0.98	1606434_at	CB918530	similar to glucose-6-phosphate isomerase	-	7e-40	At5g42740	glucose-6-phosphate isomerase, cytosolic (PGIC)	O.I.	H.G.	S.X.	Please select
0.25	30.5	0.98	1609441_at	CB971243	hypothetical protein LOC100262569	-	7e-30	At2g44680	CKB4 (CASEIN KINASE II BETA SUBUNIT 4)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
5.8	98.6	GSM147727	Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation	56
4.3	97.2	GSM147721	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	50
3.9	96.6	GSM147708	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation	37
3.7	96.2	GSM147720	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation	49
3.6	96.0	GSM147739	Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation	68
3.3	95.2	GSM147738	Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation	67
2.9	93.8	GSM436351	Seyval (SV, Seyve Villard 5-276) LD, 15h 3 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.8	93.4	GSM436347	Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.8	93.4	GSM147742	Vitis aestivalis 'Norton ' mock inoculated at 24 h post inoculation	71
2.7	93.0	GSM147722	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	51

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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