Co-expression analysis

Gene ID	1609916_s_at
Gene name	hypothetical protein LOC100266722
Homology with Arabidopsis	Similar to Atcg00120: - (HF=0)
Module size	6 genes
NF	0.73
%ile	96.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.8	0.97	1609916_s_at	CD005933	hypothetical protein LOC100266722	-	0	Atcg00120	-	O.I.	H.G.	S.X.	Please select
0.83	94.6	0.97	1618679_s_at	CB343106	-	-	4e-83	Atcg00280	-	O.I.	H.G.	S.X.	Please select
0.67	87.9	0.98	1612357_s_at	CF203581.1	-	-	4e+0	At5g66240	transducin family protein / WD-40 repeat family protein	O.I.	H.G.	S.X.	Please select
0.61	83.2	0.97	1621593_s_at	AF347624.1	-	-	2e+0	At2g31083	CLE5 (CLAVATA3/ESR-RELATED 5)	O.I.	H.G.	S.X.	Please select
0.59	80.6	0.95	1620265_at	BQ793093	-	-	0	Atcg00480	-	O.I.	H.G.	S.X.	Please select
0.50	72.7	0.96	1607877_x_at	CF202836.1	-	-	3e+1	Atcg01250	-	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
4.2	97.1	GSM436425	V. riparia (VR, PI588259) SD, 13h 28 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.9	93.8	GSM147720	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation	49
2.6	92.5	GSM147726	Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation	55
2.6	92.5	GSM147739	Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation	68
2.6	92.5	GSM436428	V. riparia (VR, PI588259) SD, 13h 42 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.6	92.5	GSM147722	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	51
2.5	91.9	GSM147721	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	50
2.4	91.3	GSM147728	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	57
2.4	91.3	GSM147743	Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation	72
2.4	91.3	GSM436406	V. riparia (VR, PI588259) LD, 15h 42 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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