Co-expression analysis

Gene ID 1609774_s_at
Gene name hypothetical protein LOC100258211
Homology with ArabidopsisSimilar to At5g45130: RHA1 (RAB HOMOLOG 1) (HF=2e-34)
Module size 8 genes
NF 0.17
%ile 25.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6787.90.971609774_s_atCA817625hypothetical protein LOC100258211-2e-34At5g45130RHA1 (RAB HOMOLOG 1)O.I.H.G.S.X.
0.4666.50.971619904_atCB974700--8e-42At5g42300UBL5 (UBIQUITIN-LIKE PROTEIN 5)O.I.H.G.S.X.
0.3345.70.981608449_atCB349956hypothetical protein LOC100247109-6e-72At1g19580GAMMA CA1 (GAMMA CARBONIC ANHYDRASE 1)O.I.H.G.S.X.
0.2632.00.981622486_atCF510820hypothetical protein LOC100247768-3e-13At4g13520SMAP1 (SMALL ACIDIC PROTEIN 1)O.I.H.G.S.X.
0.1515.60.981614946_atCF510992hypothetical protein LOC100258219-8e-64At4g2482026S proteasome regulatory subunit, putative (RPN7)O.I.H.G.S.X.
0.1111.30.971621416_atCF514904hypothetical protein LOC100263998-5e-94At1g49300RABG3E (RAB GTPASE HOMOLOG G3E)O.I.H.G.S.X.
0.1111.30.971609017_s_atCA809548hypothetical protein LOC100262493-1e-6At3g14430unknown proteinO.I.H.G.S.X. protein LOC100252925-1e-17At1g56700pyrrolidone-carboxylate peptidase family proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.896.4GSM147723Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation52Link to GEO
2.692.5GSM147735Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation64Link to GEO
2.692.5GSM147740Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation69Link to GEO
2.692.5GSM147722Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation51Link to GEO
2.692.5GSM436418V. riparia (VR, PI588259) SD, 13h 14 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.390.7GSM147739Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation68Link to GEO
2.289.9GSM147733Vitis aestivalis 'Norton ' mock inoculateds at 4 h post inoculation62Link to GEO
2.189.1GSM322366genotype: Chardonnay - disease type: Healthy - rep3GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
2.189.1GSM322369genotype: Incrocio Manzoni - disease type: Healthy - rep1GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
2.088.2GSM322365genotype: Chardonnay - disease type: Healthy - rep2GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

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