Co-expression analysis

Gene ID 1609773_at
Gene name hypothetical protein LOC100261732
Homology with ArabidopsisSimilar to At3g11600: unknown protein (HF=1e+0)
Module size 7 genes
NF 0.52
%ile 77.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8093.60.981609773_atCB978867hypothetical protein LOC100261732-1e+0At3g11600unknown proteinO.I.H.G.S.X.
0.5072.70.981621845_s_atBQ794920hypothetical protein LOC100261121-1e-13At4g29350PFN2 (PROFILIN 2)O.I.H.G.S.X.
0.5072.70.981614753_atCF415333hypothetical protein LOC100241307-2e-4At2g43090aconitase C-terminal domain-containing proteinO.I.H.G.S.X.
0.4767.70.981611204_s_atCA816223hypothetical protein LOC100251977-1e-32At2g29960CYP5 (CYCLOPHILIN 5)O.I.H.G.S.X.
0.4464.10.981620288_s_atCB982227hypothetical protein LOC100243939-8e-18At1g65970TPX2 (thioredoxin-dependent peroxidase 2)O.I.H.G.S.X.
0.3650.70.981609322_atCF415305hypothetical protein LOC100244359-2e-32At3g03070NADH-ubiquinone oxidoreductase-relatedO.I.H.G.S.X.
0.2530.50.991619551_atCF208204hypothetical protein LOC100260697-9e-12At4g08520clathrin adaptor complex small chain family proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.796.2GSM436429V. riparia (VR, PI588259) SD, 13h 42 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
3.595.7GSM436428V. riparia (VR, PI588259) SD, 13h 42 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.993.8GSM147729Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation58Link to GEO
2.793.0GSM436427V. riparia (VR, PI588259) SD, 13h 42 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.390.7GSM147723Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation52Link to GEO
2.289.9GSM147711Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation40Link to GEO
2.189.1GSM147693Vitis vinifera 'Cabernet sauvignon' mock inoculated at 12 h post inoculation22Link to GEO
2.088.2GSM436424V. riparia (VR, PI588259) SD, 13h 28 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.987.2GSM147675Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation4Link to GEO
1.886.0GSM147687Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation16Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



Back to the CoP portal site

Back to the KAGIANA project homepage