Co-expression analysis

Gene ID	1609732_at
Gene name	hypothetical protein LOC100253369
Homology with Arabidopsis	Similar to At3g15870: oxidoreductase (HF=4e-3)
Module size	7 genes
NF	0.31
%ile	45.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.77	92.3	0.95	1609732_at	CF415377	hypothetical protein LOC100253369	-	4e-3	At3g15870	oxidoreductase	O.I.	H.G.	S.X.	Please select
0.47	67.7	0.95	1614217_at	CK138191.1	hypothetical protein LOC100254189	-	4e+0	Atmg00650	-	O.I.	H.G.	S.X.	Please select
0.43	61.5	0.95	1612560_at	CF510839	hypothetical protein LOC100252389	-	1e-31	At1g76160	sks5 (SKU5 Similar 5)	O.I.	H.G.	S.X.	Please select
0.33	45.7	0.96	1612206_at	CD800449	hypothetical protein LOC100252884	-	9e-1	At2g20660	RALFL14 (ralf-like 14)	O.I.	H.G.	S.X.	Please select
0.23	27.5	0.96	1620298_at	CF513792	hypothetical protein LOC100253937	-	1e-18	At1g47270	AtTLP6 (TUBBY LIKE PROTEIN 6)	O.I.	H.G.	S.X.	Please select
0.18	19.4	0.96	1606646_at	CA812296	hypothetical protein LOC100264115	-	2e-23	At5g09870	CESA5 (CELLULOSE SYNTHASE 5)	O.I.	H.G.	S.X.	Please select
0.16	16.7	0.96	1608213_at	CF209965	hypothetical protein LOC100245233	-	9e-2	At2g26290	ARSK1 (root-specific kinase 1)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
4.3	97.2	GSM147701	Vitis vinifera 'Cabernet sauvignon' mock inoculated at 48 h post inoculation	30
3.4	95.5	GSM147683	Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 48 h post inoculation	12
2.9	93.8	GSM147682	Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 24 h post inoculation	11
2.2	89.9	GSM436372	Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.2	89.9	GSM147689	Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 48 h post inoculation	18
2.1	89.1	GSM147708	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation	37
2.1	89.1	GSM436371	Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.1	89.1	GSM147743	Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation	72
2.1	89.1	GSM147711	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	40
2.1	89.1	GSM147734	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	63

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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