Co-expression analysis

Gene ID	1609694_at
Gene name	similar to SNF2 domain-containing protein, putative, expressed
Homology with Arabidopsis	Similar to At1g08600: ATRX (HF=1e-23)
Module size	6 genes
NF	0.58
%ile	84.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.8	0.99	1609694_at	CB343060	similar to SNF2 domain-containing protein, putative, expressed	-	1e-23	At1g08600	ATRX	O.I.	H.G.	S.X.	Please select
0.73	90.8	0.99	1619563_at	CF514348	hypothetical protein LOC100255371	-	6e-3	At5g41770	crooked neck protein, putative / cell cycle protein, putative	O.I.	H.G.	S.X.	Please select
0.61	83.2	0.99	1613432_at	CF516959	hypothetical protein LOC100244217	-	1e-15	At1g67680	7S RNA binding	O.I.	H.G.	S.X.	Please select
0.53	75.2	0.99	1611483_at	CF207449	hypothetical protein LOC100253154	-	7e+0	Atmg00320	-	O.I.	H.G.	S.X.	Please select
0.46	66.5	0.99	1614110_s_at	CD801616	cullin 1	-	2e-19	At4g02570	ATCUL1 (ARABIDOPSIS THALIANA CULLIN 1)	O.I.	H.G.	S.X.	Please select
0.21	24.0	0.99	1617845_at	CD800649	hypothetical protein LOC100263968	-	4e-35	At2g38630	-	O.I.	H.G.	S.X.	Please select

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Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
3.4	95.5	GSM147720	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation	49
2.8	93.4	GSM147727	Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation	56
2.7	93.0	GSM147739	Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation	68
2.7	93.0	GSM436389	V. riparia (VR, PI588259) LD, 15h 1 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.7	93.0	GSM147722	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	51
2.6	92.5	GSM147712	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 24 h post inoculation	41
2.5	91.9	GSM436347	Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.4	91.3	GSM147723	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	52
2.3	90.7	GSM147740	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	69
2.3	90.7	GSM147708	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation	37

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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