Co-expression analysis

Gene ID 1609683_at
Gene name hypothetical protein LOC100249982
Homology with ArabidopsisSimilar to At2g47520: AP2 domain-containing transcription factor, putative (HF=2e-11)
Module size 6 genes
NF 0.01
%ile 0.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.80.811609683_atCF604955hypothetical protein LOC100249982-2e-11At2g47520AP2 domain-containing transcription factor, putativeO.I.H.G.S.X.
0.1111.30.821610228_atCB348812hypothetical protein LOC100242230-4e+0At5g24580copper-binding family proteinO.I.H.G.S.X.
0.045.20.821619910_atCF405078--2e-1At3g27410unknown proteinO.I.H.G.S.X.
0.034.20.821614098_atCF608417hypothetical protein LOC100267240-6e-18At2g21050amino acid permease, putativeO.I.H.G.S.X.
-0.50.811608938_atCB002728hypothetical protein LOC100257586-2e+0At5g06480MD-2-related lipid recognition domain-containing protein / ML domain-containing proteinO.I.H.G.S.X.
-0.50.811612518_atCF372327hypothetical protein LOC100243598-2e-30At1g78780pathogenesis-related family proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
4.497.3GSM322363genotype: Chardonnay - disease type: Bois Noir infected - rep3GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
4.397.2GSM322367genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep1GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
3.696.0GSM322365genotype: Chardonnay - disease type: Healthy - rep2GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
3.495.5GSM322364genotype: Chardonnay - disease type: Healthy - rep1GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
3.294.9GSM322361genotype: Chardonnay - disease type: Bois Noir infected - rep1GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
3.094.2GSM322369genotype: Incrocio Manzoni - disease type: Healthy - rep1GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
2.993.8GSM147738Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation67Link to GEO
2.793.0GSM147742Vitis aestivalis 'Norton ' mock inoculated at 24 h post inoculation71Link to GEO
2.692.5GSM147743Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation72Link to GEO
2.692.5GSM322366genotype: Chardonnay - disease type: Healthy - rep3GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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