Co-expression analysis

Gene ID 1609587_at
Gene name
Homology with ArabidopsisSimilar to At1g32220: binding / catalytic/ coenzyme binding (HF=5e-9)
Module size 21 genes
NF 0.23
%ile 33.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7792.30.951609587_atCF202068.1--5e-9At1g32220binding / catalytic/ coenzyme bindingO.I.H.G.S.X.
0.4767.70.971617537_atCF214567hypothetical protein LOC100267729-7e-2At1g53460unknown proteinO.I.H.G.S.X.
0.4361.50.961621364_s_atCF511664hypothetical protein LOC100252604-2e-12At2g24940AtMAPR2 (Arabidopsis thaliana membrane-associated progesterone binding protein 2)O.I.H.G.S.X.
0.4158.70.971615292_atCF214583similar to oligopeptidase A-1e-37At5g10540peptidase M3 family protein / thimet oligopeptidase family proteinO.I.H.G.S.X.
0.3751.70.971611597_atCB918250hypothetical protein LOC100252439-1e-1At1g51650ATP synthase epsilon chain, mitochondrialO.I.H.G.S.X.
0.3141.30.971616536_atCF608264hypothetical protein LOC100249974-1e-10At3g08020protein binding / zinc ion bindingO.I.H.G.S.X.
0.2937.70.971607488_atCF373706hypothetical protein LOC100245682-1e+0At3g06985LCR44 (Low-molecular-weight cysteine-rich 44)O.I.H.G.S.X.
0.2734.00.971612000_atCB342454hypothetical protein LOC100260307-2e-1At1g27130ATGSTU13 (ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE TAU 13)O.I.H.G.S.X.
0.2632.00.981616447_atBQ792485hypothetical protein LOC100242721-5e+0At5g25210unknown proteinO.I.H.G.S.X.
0.2022.40.971606933_a_atCB007886--1e-20At1g01360unknown proteinO.I.H.G.S.X.
0.1920.90.981620454_s_atAF467946.1lipid transfer protein-2e+0At5g01870lipid transfer protein, putativeO.I.H.G.S.X.
0.1819.40.971621964_atCF207985hypothetical protein LOC100259817-2e-1At3g44950glycine-rich proteinO.I.H.G.S.X.
0.1819.40.981609281_s_atAF467945.1lipid transfer protein-2e+0At5g01870lipid transfer protein, putativeO.I.H.G.S.X.
0.1819.40.961614534_atCF603286hypothetical protein LOC100253600-3e-38At4g15080zinc finger (DHHC type) family proteinO.I.H.G.S.X.
0.1616.70.971622757_atCF510915hypothetical protein LOC100253200-8e-6At1g65580FRA3 (FRAGILE FIBER3)O.I.H.G.S.X.
0.1616.70.971616237_s_atBQ792111hypothetical protein LOC100253030-7e-5At4g23420short-chain dehydrogenase/reductase (SDR) family proteinO.I.H.G.S.X.
0.1515.60.981620220_atCB345823hypothetical protein LOC100243115-7e-46At5g54760eukaryotic translation initiation factor SUI1, putativeO.I.H.G.S.X.
0.1414.40.961621040_atBQ799491hypothetical protein LOC100252271-1e-1At1g31750proline-rich family proteinO.I.H.G.S.X.
0.1212.10.961607335_atCD801694hypothetical protein LOC100245908-1e-20At3g06050PRXIIF (PEROXIREDOXIN IIF)O.I.H.G.S.X.
0.1111.30.971607928_atCF201793.1--5e-3At4g08230glycine-rich proteinO.I.H.G.S.X.
0.1010.30.981617139_s_atCF202008.1hypothetical protein LOC100246711-7e+0At5g37580-O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
1.987.2GSM147697Vitis vinifera 'Cabernet sauvignon' mock inoculateds at 4 h post inoculation26Link to GEO
1.987.2GSM322368genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep2GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
1.987.2GSM299461C_ni_rep1GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
1.784.7GSM287869Green hard berry C3 from plant 1 cluster distal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO
1.683.3GSM322367genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep1GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
1.683.3GSM299459D_i_rep1GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
1.581.7GSM299455C_ni_rep2GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
1.479.9GSM147729Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation58Link to GEO
1.479.9GSM147722Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation51Link to GEO
1.479.9GSM147728Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation57Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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