Co-expression analysis

Gene ID 1609578_at
Gene name hypothetical protein LOC100247401
Homology with ArabidopsisSimilar to At2g17530: protein kinase family protein (HF=5e-27)
Module size 7 genes
NF 0.60
%ile 86.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7390.80.981609578_atCF372299hypothetical protein LOC100247401-5e-27At2g17530protein kinase family proteinO.I.H.G.S.X.
0.6384.30.981620337_atCF213940similar to ATCNGC5 (CYCLIC NUCLEOTIDE GATED CHANNEL 5); calmodulin binding / cyclic nucleotide binding / potassium channel-2e-5At5g62500ATEB1B (END BINDING PROTEIN 1B)O.I.H.G.S.X.
0.5577.30.981606693_atCF510824hypothetical protein LOC100265371-3e-43At5g05670signal recognition particle bindingO.I.H.G.S.X.
0.5375.20.981612637_atCB982953hypothetical protein LOC100259097-2e-3At5g13390NEF1 (NO EXINE FORMATION 1)O.I.H.G.S.X.
0.5072.70.981614181_atCB340606hypothetical protein LOC100263351-1e-1At1g34320unknown proteinO.I.H.G.S.X.
0.5072.70.981620044_s_atCF209634hypothetical protein LOC100247307-7e-8At5g61510NADP-dependent oxidoreductase, putativeO.I.H.G.S.X.
0.4464.10.991610114_atCD003699similar to SPla/RYanodine receptor (SPRY) domain-containing protein-8e+0At5g51710KEA5O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
6.498.9GSM322369genotype: Incrocio Manzoni - disease type: Healthy - rep1GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
4.797.7GSM436429V. riparia (VR, PI588259) SD, 13h 42 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
4.397.2GSM322367genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep1GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
4.196.9GSM436428V. riparia (VR, PI588259) SD, 13h 42 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
3.796.2GSM436427V. riparia (VR, PI588259) SD, 13h 42 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
3.094.2GSM436406V. riparia (VR, PI588259) LD, 15h 42 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.692.5GSM436408V. riparia (VR, PI588259) LD, 15h 42 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.491.3GSM322370genotype: Incrocio Manzoni - disease type: Healthy - rep2GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
2.491.3GSM436389V. riparia (VR, PI588259) LD, 15h 1 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.390.7GSM436425V. riparia (VR, PI588259) SD, 13h 28 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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