Co-expression analysis

Gene ID 1609574_at
Gene name hypothetical protein LOC100251235
Homology with ArabidopsisSimilar to At1g19330: unknown protein (HF=2e-17)
Module size 8 genes
NF 0.69
%ile 93.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6384.30.971609574_atCF212064hypothetical protein LOC100251235-2e-17At1g19330unknown proteinO.I.H.G.S.X.
0.8093.60.981620164_atCF414117hypothetical protein LOC100263547-6e+0At5g10160beta-hydroxyacyl-ACP dehydratase, putativeO.I.H.G.S.X.
0.7591.30.971607678_atCB972163hypothetical protein LOC100254822-3e-25At2g34710PHB (PHABULOSA)O.I.H.G.S.X.
0.7189.50.971620583_s_atCF213679hypothetical protein LOC100247041-5e-1At4g24231unknown proteinO.I.H.G.S.X.
0.7189.50.971622002_atCF513939hypothetical protein LOC100264846-2e-1At1g29951CPuORF35 (Conserved peptide upstream open reading frame 35)O.I.H.G.S.X.
0.6081.90.971610422_atCF215178hypothetical protein LOC100246625-5e-12At3g51670SEC14 cytosolic factor family protein / phosphoglyceride transfer family proteinO.I.H.G.S.X.
0.5273.90.971617368_atCF512540similar to beta-1,3-glucanase-1e+0At2g47110UBQ6O.I.H.G.S.X.
0.5072.70.981611382_atCF212352hypothetical protein LOC100264955-2e-6At3g53850-O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
2.289.9GSM287881Green soft berry B10 from plant 1 cluster proximal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO
2.088.2GSM322370genotype: Incrocio Manzoni - disease type: Healthy - rep2GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
1.987.2GSM147675Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation4Link to GEO
1.886.0GSM287866Green hard berry B21 from plant 1 cluster proximal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO
1.886.0GSM147692Vitis vinifera 'Cabernet sauvignon' mock inoculated at 8 h post inoculation21Link to GEO
1.886.0GSM287871Green hard berry C4 from plant 1 cluster distal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initationLink to GEO
1.886.0GSM147743Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation72Link to GEO
1.886.0GSM287882Green soft berry A21 from plant 1 cluster proximal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initationLink to GEO
1.784.7GSM147680Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation9Link to GEO
1.784.7GSM287884Green soft berry C7 from plant 1 cluster distal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initationLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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