Co-expression analysis

Gene ID 1609571_at
Gene name hypothetical protein LOC100258119
Homology with ArabidopsisSimilar to At4g36860: zinc ion binding (HF=6e-12)
Module size 7 genes
NF 0.25
%ile 35.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5980.60.961609571_atBQ795107hypothetical protein LOC100258119-6e-12At4g36860zinc ion bindingO.I.H.G.S.X.
0.4361.50.961615899_atCD013375hypothetical protein LOC100242540-9e-3At4g14570acylaminoacyl-peptidase-relatedO.I.H.G.S.X.
0.2937.70.971616236_atCB007372hypothetical protein LOC100260831-2e-22At1g43900protein phosphatase 2C, putative / PP2C, putativeO.I.H.G.S.X.
0.2327.50.971607999_s_atBQ797116hypothetical protein LOC100244107-4e-64At3g45310cysteine proteinase, putativeO.I.H.G.S.X.
0.1616.70.971609012_atCB341487hypothetical protein LOC100254309-1e-4At2g01600epsin N-terminal homology (ENTH) domain-containing proteinO.I.H.G.S.X.
0.1616.70.971606800_atCF208493hypothetical protein LOC100250516-1e-2At1g54160NF-YA5 (NUCLEAR FACTOR Y, SUBUNIT A5)O.I.H.G.S.X.
0.1212.10.981613821_atCF215190papain-like cysteine proteinase-1e-11At4g16190cysteine proteinase, putativeO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
2.893.4GSM147741Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation70Link to GEO
2.289.9GSM436394V. riparia (VR, PI588259) LD, 15h 7 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.088.2GSM287873Green hard berry B9 from plant 2 cluster proximal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO
1.987.2GSM436355Seyval (SV, Seyve Villard 5-276) LD, 15h 14 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.987.2GSM436366Seyval (SV, Seyve Villard 5-276) LD, 15h 42 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.987.2GSM287886Green soft berry C22 from plant 2 cluster proximal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initationLink to GEO
1.987.2GSM436426V. riparia (VR, PI588259) SD, 13h 28 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.886.0GSM436413V. riparia (VR, PI588259) SD, 13h 3 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.784.7GSM436401V. riparia (VR, PI588259) LD, 15h 21 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.784.7GSM436402V. riparia (VR, PI588259) LD, 15h 21 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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