Co-expression analysis

Gene ID 1609508_at
Gene name hypothetical protein LOC100242787
Homology with ArabidopsisSimilar to At5g45960: GDSL-motif lipase/hydrolase family protein (HF=4e-3)
Module size 6 genes
NF 0.51
%ile 75.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.80.961609508_atCB976923hypothetical protein LOC100242787-4e-3At5g45960GDSL-motif lipase/hydrolase family proteinO.I.H.G.S.X.
0.6787.90.951618432_atCB345244hypothetical protein LOC100267315-6e+0At5g13825unknown proteinO.I.H.G.S.X.
0.6081.90.951612382_atCB978155--2e-1At3g57870SCE1 (SUMO CONJUGATION ENZYME 1)O.I.H.G.S.X.
0.5375.20.951620398_atCA810891hypothetical LOC100263767-1e-3At3g09690hydrolase, alpha/beta fold family proteinO.I.H.G.S.X.
0.5072.70.961617386_atCF372270hypothetical protein LOC100265283-2e-27At3g02580STE1 (STEROL 1)O.I.H.G.S.X.
0.2225.60.951621016_atCA817314similar to transporter-related-3e-10At5g20380PHT4O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.294.9GSM147735Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation64Link to GEO
3.094.2GSM147734Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation63Link to GEO
2.893.4GSM436357Seyval (SV, Seyve Villard 5-276) LD, 15h 14 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.793.0GSM147732Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation61Link to GEO
2.591.9GSM436376Seyval (SV, Seyve Villard 5-276) SD, 13h 14 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.591.9GSM147737Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation66Link to GEO
2.491.3GSM147740Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation69Link to GEO
2.491.3GSM436354Seyval (SV, Seyve Villard 5-276) LD, 15h 7 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.491.3GSM436360Seyval (SV, Seyve Villard 5-276) LD, 15h 21 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.390.7GSM436382Seyval (SV, Seyve Villard 5-276) SD, 13h 28 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO

Inter-species module comparison

A co-expression module including the maize gene, ZmAffx.1340.1.S1_at, orthologous to the query gene, 1609508_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.9199.0ZmAffx.1340.1.S1_atAt5g45960--7e-45Atcg01080-O.I.H.G.S.X.
0.6785.8Zm.18267.1.S1_atAt5g45960--2e+0At5g59845gibberellin-regulated family proteinO.I.H.G.S.X.
0.6785.8ZmAffx.1139.1.S1_atAt5g45960--5e+0At5g07370IPK2a (INOSITOL POLYPHOSPHATE KINASE 2 ALPHA)O.I.H.G.S.X.
0.5065.7ZmAffx.1341.1.S1_atAt5g45960--2e-119Atcg01090-O.I.H.G.S.X.
0.4455.7ZmAffx.181.1.S1_atAt5g45960--8e-1At5g25640-O.I.H.G.S.X.
0.2828.1Zm.1059.2.A1_a_atAt5g45960ATOZI1-2e-7At4g00860ATOZI1O.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum



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