Co-expression analysis

Gene ID 1609508_at
Gene name hypothetical protein LOC100242787
Homology with ArabidopsisSimilar to At5g45960: GDSL-motif lipase/hydrolase family protein (HF=4e-3)
Module size 6 genes
NF 0.51
%ile 75.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.80.961609508_atCB976923hypothetical protein LOC100242787-4e-3At5g45960GDSL-motif lipase/hydrolase family proteinO.I.H.G.S.X.
0.6787.90.951618432_atCB345244hypothetical protein LOC100267315-6e+0At5g13825unknown proteinO.I.H.G.S.X.
0.6081.90.951612382_atCB978155--2e-1At3g57870SCE1 (SUMO CONJUGATION ENZYME 1)O.I.H.G.S.X.
0.5375.20.951620398_atCA810891hypothetical LOC100263767-1e-3At3g09690hydrolase, alpha/beta fold family proteinO.I.H.G.S.X.
0.5072.70.961617386_atCF372270hypothetical protein LOC100265283-2e-27At3g02580STE1 (STEROL 1)O.I.H.G.S.X.
0.2225.60.951621016_atCA817314similar to transporter-related-3e-10At5g20380PHT4O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.294.9GSM147735Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation64Link to GEO
3.094.2GSM147734Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation63Link to GEO
2.893.4GSM436357Seyval (SV, Seyve Villard 5-276) LD, 15h 14 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.793.0GSM147732Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation61Link to GEO
2.591.9GSM436376Seyval (SV, Seyve Villard 5-276) SD, 13h 14 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.591.9GSM147737Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation66Link to GEO
2.491.3GSM147740Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation69Link to GEO
2.491.3GSM436354Seyval (SV, Seyve Villard 5-276) LD, 15h 7 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.491.3GSM436360Seyval (SV, Seyve Villard 5-276) LD, 15h 21 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.390.7GSM436382Seyval (SV, Seyve Villard 5-276) SD, 13h 28 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO

Inter-species module comparison

A co-expression module including the wheat gene, Ta.22390.1.S1_at, orthologous to the query gene, 1609508_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.6483.6Ta.22390.1.S1_atAt5g45960--3e+0At2g21600ATRER1BO.I.H.G.S.X.
0.6786.3TaAffx.29975.1.S1_atAt5g45960--7e-2At1g15125S-adenosylmethionine-dependent methyltransferase/ methyltransferaseO.I.H.G.S.X.
0.6483.6Ta.3320.2.A1_atAt5g45960--2e+0At5g63660PDF2.5O.I.H.G.S.X.
0.6383.1Ta.16590.1.S1_atAt5g45960--2e+0At3g17670bindingO.I.H.G.S.X.
0.5779.2Ta.1940.1.S1_x_atAt5g45960--3e-1At2g24810pathogenesis-related thaumatin family proteinO.I.H.G.S.X.
0.5678.6Ta.1808.1.A1_s_atAt5g45960--1e+0At5g27050AGL101O.I.H.G.S.X.
0.4969.7TaAffx.38572.2.S1_atAt5g45960--4e-3At5g60690REV (REVOLUTA)O.I.H.G.S.X.
0.4767.9Ta.3628.3.S1_x_atAt5g45960--4e+0At5g12840NF-YA1 (NUCLEAR FACTOR Y, SUBUNIT A1)O.I.H.G.S.X.
0.4464.5Ta.26299.1.A1_atAt5g45960--2e-3At2g47060serine/threonine protein kinase, putativeO.I.H.G.S.X.
0.4464.5Ta.3442.1.S1_atAt5g45960--6e+0At5g130505-FCL (5-FORMYLTETRAHYDROFOLATE CYCLOLIGASE)O.I.H.G.S.X.
0.4362.2Ta.11542.1.S1_x_atAt5g45960--2e-2At2g01340unknown proteinO.I.H.G.S.X.
0.4159.6TaAffx.66041.1.S1_atAt5g45960--2e+0At3g18280protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinO.I.H.G.S.X.
0.4058.4Ta.30439.1.S1_atAt5g45960--7e+0At2g38530LTP2 (LIPID TRANSFER PROTEIN 2)O.I.H.G.S.X.
0.4058.4Ta.8577.1.A1_atAt5g45960--8e-6At3g08570protein binding / signal transducerO.I.H.G.S.X.
0.3956.1Ta.7281.3.S1_a_atAt5g45960--5e-6At3g15680zinc finger (Ran-binding) family proteinO.I.H.G.S.X.
0.3854.7Ta.6745.1.S1_atAt5g45960--1e-7At2g36570leucine-rich repeat transmembrane protein kinase, putativeO.I.H.G.S.X.
0.3244.4Ta.18983.1.S1_atAt5g45960--9e+0At1g18730NDF6 (NDH DEPENDENT FLOW 6)O.I.H.G.S.X.
0.3142.7Ta.7281.1.S1_a_atAt5g45960--4e-11At3g15680zinc finger (Ran-binding) family proteinO.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Zea_mays



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