Co-expression analysis

Gene ID	1609490_s_at
Gene name	hypothetical protein LOC100267319
Homology with Arabidopsis	Similar to At4g24760: unknown protein (HF=6e-9)
Module size	8 genes
NF	0.37
%ile	55.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.74	91.0	0.97	1609490_s_at	CK138152.1	hypothetical protein LOC100267319	-	6e-9	At4g24760	unknown protein	O.I.	H.G.	S.X.	Please select
0.50	72.7	0.98	1611714_at	BQ794807	hypothetical protein LOC100264866	-	2e-61	At2g42500	PP2A-4	O.I.	H.G.	S.X.	Please select
0.47	67.7	0.98	1622185_at	CF209948	-	-	3e-2	At1g78915	binding	O.I.	H.G.	S.X.	Please select
0.40	57.7	0.98	1613071_at	CB975511	-	-	5e+0	At5g42070	unknown protein	O.I.	H.G.	S.X.	Please select
0.40	57.7	0.98	1608829_at	CD802477	hypothetical protein LOC100258592	-	9e-24	At4g03415	catalytic/ protein serine/threonine phosphatase	O.I.	H.G.	S.X.	Please select
0.35	48.5	0.97	1609364_at	CD013445	similar to thioredoxin-related protein	-	8e-6	At3g56580	zinc finger (C3HC4-type RING finger) family protein	O.I.	H.G.	S.X.	Please select
0.28	37.7	0.97	1615059_at	CF212962	hypothetical protein LOC100246880	-	2e+0	At2g20463	-	O.I.	H.G.	S.X.	Please select
0.20	22.4	0.97	1613281_at	CF513460	hypothetical protein LOC100249314	-	4e-33	At3g22440	hydroxyproline-rich glycoprotein family protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
4.2	97.1	GSM147722	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	51
3.8	96.4	GSM147740	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	69
3.3	95.2	GSM147728	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	57
3.1	94.6	GSM147710	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	39
3.1	94.6	GSM287875	Green hard berry C17 from plant 2 cluster proximal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
3.1	94.6	GSM287866	Green hard berry B21 from plant 1 cluster proximal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
2.9	93.8	GSM147741	Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation	70
2.8	93.4	GSM287888	Green soft berry C24 from plant 2 cluster distal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
2.7	93.0	GSM322364	genotype: Chardonnay - disease type: Healthy - rep1	GSE12842	Gene expression in grapevine in response to Bois noir infection
2.5	91.9	GSM147717	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	46

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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