Co-expression analysis

Gene ID	1609397_at
Gene name	hypothetical protein LOC100248717
Homology with Arabidopsis	Similar to At5g64300: ATGCH (HF=1e-35)
Module size	6 genes
NF	0.52
%ile	77.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.8	0.93	1609397_at	CF512090	hypothetical protein LOC100248717	-	1e-35	At5g64300	ATGCH	O.I.	H.G.	S.X.	Please select
0.55	77.3	0.93	1616303_a_at	CF212684	hypothetical protein LOC100241801	-	8e-12	At1g28960	ATNUDX15 (ARABIDOPSIS THALIANA NUDIX HYDROLASE HOMOLOG 15)	O.I.	H.G.	S.X.	Please select
0.46	66.5	0.93	1622670_s_at	CF207059.1	hypothetical protein LOC100242012	-	1e+1	At5g05590	PAI2 (PHOSPHORIBOSYLANTHRANILATE ISOMERASE 2)	O.I.	H.G.	S.X.	Please select
0.40	57.7	0.94	1608169_at	CD798119	hypothetical protein LOC100244143	-	3e-14	At5g03905	hesB-like domain-containing protein	O.I.	H.G.	S.X.	Please select
0.38	53.6	0.92	1609744_at	CF203760.1	hypothetical protein LOC100240811 /// hypothetical protein LOC100263073	-	2e+0	At3g42630	pentatricopeptide (PPR) repeat-containing protein	O.I.	H.G.	S.X.	Please select
0.31	41.3	0.94	1609984_at	CB343408	hypothetical protein LOC100262346	-	1e+0	At4g15093	catalytic LigB subunit of aromatic ring-opening dioxygenase family	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
4.8	97.8	GSM147690	Vitis vinifera 'Cabernet sauvignon' mock inoculated at 0 h post inoculation	19
3.2	94.9	GSM436365	Seyval (SV, Seyve Villard 5-276) LD, 15h 42 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
3.2	94.9	GSM147675	Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	4
3.1	94.6	GSM147693	Vitis vinifera 'Cabernet sauvignon' mock inoculated at 12 h post inoculation	22
3.0	94.2	GSM147692	Vitis vinifera 'Cabernet sauvignon' mock inoculated at 8 h post inoculation	21
2.9	93.8	GSM147687	Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	16
2.7	93.0	GSM147686	Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	15
2.5	91.9	GSM436419	V. riparia (VR, PI588259) SD, 13h 14 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.5	91.9	GSM436423	V. riparia (VR, PI588259) SD, 13h 21 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.5	91.9	GSM147722	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	51

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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