Co-expression analysis

Gene ID	1609391_s_at
Gene name	hypothetical protein LOC100243780
Homology with Arabidopsis	Similar to At5g09380: DNA-directed RNA polymerase III RPC4 family protein (HF=3e+0)
Module size	6 genes
NF	0.73
%ile	96.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.8	0.94	1609391_s_at	CF404650	hypothetical protein LOC100243780	-	3e+0	At5g09380	DNA-directed RNA polymerase III RPC4 family protein	O.I.	H.G.	S.X.	Please select
0.67	87.9	0.96	1607667_at	CF212686	hypothetical protein LOC100240808	-	3e-32	At5g01190	LAC10 (laccase 10)	O.I.	H.G.	S.X.	Please select
0.67	87.9	0.97	1607960_at	CF415350	hypothetical protein LOC100243780	-	3e-2	At4g20470	unknown protein	O.I.	H.G.	S.X.	Please select
0.63	84.3	0.93	1610251_at	CF213132	-	-	4e+0	At5g65080	MAF5 (MADS AFFECTING FLOWERING 5)	O.I.	H.G.	S.X.	Please select
0.63	84.3	0.93	1610830_at	CF213757	hypothetical protein LOC100263385	-	5e-10	At2g45820	DNA-binding protein, putative	O.I.	H.G.	S.X.	Please select
0.61	83.2	0.93	1609045_at	CF214620	isoflavone reductase-like protein 4	-	2e-7	At1g75280	isoflavone reductase, putative	O.I.	H.G.	S.X.	Please select

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Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
3.5	95.7	GSM147728	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	57
3.5	95.7	GSM147721	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	50
3.2	94.9	GSM147739	Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation	68
3.0	94.2	GSM147723	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	52
2.8	93.4	GSM147722	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	51
2.5	91.9	GSM147726	Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation	55
2.5	91.9	GSM147742	Vitis aestivalis 'Norton ' mock inoculated at 24 h post inoculation	71
2.2	89.9	GSM147709	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	38
2.2	89.9	GSM147738	Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation	67
2.2	89.9	GSM147733	Vitis aestivalis 'Norton ' mock inoculateds at 4 h post inoculation	62

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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