Co-expression analysis

Gene ID 1609315_at
Gene name
Homology with ArabidopsisSimilar to At5g40750: - (HF=5e+0)
Module size 6 genes
NF 0.80
%ile 98.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.80.941609315_atCD798625--5e+0At5g40750-O.I.H.G.S.X.
0.8093.60.951611392_atCF517133hypothetical protein LOC100246263-5e+0At3g03430polcalcin, putative / calcium-binding pollen allergen, putativeO.I.H.G.S.X.
0.8093.60.951611063_atCB340267hypothetical protein LOC100246364-5e-5At1g17100SOUL heme-binding family proteinO.I.H.G.S.X.
0.7390.80.931618968_atCA817496hypothetical protein LOC100248614-2e-22At5g18240MYR1 (MYb-related protein 1)O.I.H.G.S.X.
0.6183.20.921607783_atCA817203hypothetical protein LOC100263854-3e-1At2g34100unknown proteinO.I.H.G.S.X.
0.5577.30.951610662_atCF513787hypothetical protein LOC100254082-3e-2At1g76020-O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
9.699.6GSM322362genotype: Chardonnay - disease type: Bois Noir infected - rep2GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
3.395.2GSM436386Seyval (SV, Seyve Villard 5-276) SD, 13h 42 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
3.294.9GSM436397V. riparia (VR, PI588259) LD, 15h 14 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.692.5GSM436399V. riparia (VR, PI588259) LD, 15h 14 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.591.9GSM436367Seyval (SV, Seyve Villard 5-276) SD, 13h 1 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.491.3GSM436346Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.491.3GSM436355Seyval (SV, Seyve Villard 5-276) LD, 15h 14 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.491.3GSM436359Seyval (SV, Seyve Villard 5-276) LD, 15h 21 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.390.7GSM436360Seyval (SV, Seyve Villard 5-276) LD, 15h 21 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.289.9GSM436400V. riparia (VR, PI588259) LD, 15h 21 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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