Co-expression analysis

Gene ID 1609313_at
Gene name similar to 2-oxo acid dehydrogenase, lipoyl-binding site
Homology with ArabidopsisSimilar to At4g22320: unknown protein (HF=6e-2)
Module size 15 genes
NF 0.35
%ile 51.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6787.90.971609313_atCF403611similar to 2-oxo acid dehydrogenase, lipoyl-binding site-6e-2At4g22320unknown proteinO.I.H.G.S.X.
0.5779.80.981617194_atBQ794485hypothetical protein LOC100264514-5e-1At5g37520unknown proteinO.I.H.G.S.X.
0.5072.70.981614871_s_atCF404051hypothetical protein LOC100266189-7e-5At4g32551LUG (LEUNIG)O.I.H.G.S.X.
0.4464.10.981607079_atBQ797339hypothetical protein LOC100263131-2e+0At3g56490zinc-binding protein, putative / protein kinase C inhibitor, putativeO.I.H.G.S.X.
0.4361.50.981612817_atCB002820hypothetical protein LOC100267132-3e-1At3g62330zinc knuckle (CCHC-type) family proteinO.I.H.G.S.X.
0.4158.70.981610845_atCF208629hypothetical protein LOC100245365-2e+0At1g68030PHD finger protein-relatedO.I.H.G.S.X.
0.4158.70.981612995_atCD012259--4e-18At3g13340WD-40 repeat family proteinO.I.H.G.S.X.
0.4057.70.981618681_atBQ797518hypothetical protein LOC100241923-1e-30At1g49760PAB8 (POLY(A) BINDING PROTEIN 8)O.I.H.G.S.X.
0.3751.70.981608241_atCD798818hypothetical protein LOC100251333-1e-15At5g06000EIF3G2O.I.H.G.S.X.
0.3650.70.981616840_atCF608637hypothetical protein LOC100255499-9e-15At1g09140SF2/ASF-like splicing modulator (SRP30)O.I.H.G.S.X.
0.3650.70.981608869_s_atCF514065glyceraldehyde-3-phosphate dehydrogenase-4e-41At3g04120GAPC1 (GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE C SUBUNIT 1)O.I.H.G.S.X.
0.3345.70.981607580_s_atAF501624.1similar to histone H3 /// similar to histone H3-6e-87At4g40040histone H3.2O.I.H.G.S.X.
0.2632.00.981614869_atCF208077hypothetical protein LOC100251847-1e-12At1g50500HIT1 (HEAT-INTOLERANT 1)O.I.H.G.S.X.
0.2225.60.981615071_atCF512279--6e-13At1g16810unknown proteinO.I.H.G.S.X.
0.1515.60.981610434_atCF404432hypothetical protein LOC100244562-1e+0At5g24090acidic endochitinase (CHIB1)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.996.6GSM287887Green soft berry C23 from plant 2 cluster distal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO
2.793.0GSM299453B_i_rep1GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
2.793.0GSM299462D_ni_rep1GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
2.289.9GSM287896Pink soft berry C27 from plant 2 cluster distal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initationLink to GEO
2.189.1GSM322361genotype: Chardonnay - disease type: Bois Noir infected - rep1GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
2.189.1GSM147735Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation64Link to GEO
2.189.1GSM322366genotype: Chardonnay - disease type: Healthy - rep3GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
1.987.2GSM287888Green soft berry C24 from plant 2 cluster distal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initationLink to GEO
1.987.2GSM322367genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep1GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
1.987.2GSM322369genotype: Incrocio Manzoni - disease type: Healthy - rep1GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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