Co-expression analysis

Gene ID	1609224_at
Gene name
Homology with Arabidopsis	Similar to At5g54745: DegP protease family (HF=4e+0)
Module size	6 genes
NF	0.86
%ile	99.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.8	0.92	1609224_at	CF203372.1	-	-	4e+0	At5g54745	DegP protease family	O.I.	H.G.	S.X.	Please select
0.91	98.8	0.96	1617743_at	CF201643.1	-	-	2e-12	At1g52870	peroxisomal membrane protein-related	O.I.	H.G.	S.X.	Please select
0.83	94.6	0.95	1611368_at	CF203753.1	-	-	6e-18	At4g35090	CAT2 (CATALASE 2)	O.I.	H.G.	S.X.	Please select
0.80	93.6	0.97	1618231_at	AF141642.1	-	-	8e-50	At2g37170	PIP2B (PLASMA MEMBRANE INTRINSIC PROTEIN 2)	O.I.	H.G.	S.X.	Please select
0.67	87.9	0.95	1617744_x_at	CF205571.1	-	-	2e+0	At1g03660	-	O.I.	H.G.	S.X.	Please select
0.61	83.2	0.96	1616794_at	CF205534.1	-	-	3e-26	At3g58680	MBF1B (MULTIPROTEIN BRIDGING FACTOR 1B)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
4.9	97.9	GSM436415	V. riparia (VR, PI588259) SD, 13h 7 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
3.8	96.4	GSM436417	V. riparia (VR, PI588259) SD, 13h 7 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
3.5	95.7	GSM436421	V. riparia (VR, PI588259) SD, 13h 21 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
3.4	95.5	GSM436356	Seyval (SV, Seyve Villard 5-276) LD, 15h 14 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
3.0	94.2	GSM436400	V. riparia (VR, PI588259) LD, 15h 21 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.7	93.0	GSM147703	Vitis vinifera 'Cabernet sauvignon' mock inoculated at 4 h post inoculation	32
2.5	91.9	GSM436409	V. riparia (VR, PI588259) SD, 13h 1 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.5	91.9	GSM436378	Seyval (SV, Seyve Villard 5-276) SD, 13h 14 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.5	91.9	GSM436410	V. riparia (VR, PI588259) SD, 13h 1 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.4	91.3	GSM436407	V. riparia (VR, PI588259) LD, 15h 42 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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