Co-expression analysis

Gene ID	1609196_at
Gene name	hypothetical protein LOC100256073
Homology with Arabidopsis	Similar to At3g14020: NF-YA6 (NUCLEAR FACTOR Y, SUBUNIT A6) (HF=3e-1)
Module size	7 genes
NF	0.57
%ile	83.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.43	61.5	0.95	1609196_at	BQ792412	hypothetical protein LOC100256073	-	3e-1	At3g14020	NF-YA6 (NUCLEAR FACTOR Y, SUBUNIT A6)	O.I.	H.G.	S.X.	Please select
0.73	90.8	0.97	1621697_at	CF207483	hypothetical protein LOC100247318	-	1e+0	At5g57440	GS1	O.I.	H.G.	S.X.	Please select
0.71	89.5	0.96	1620001_at	CF207174	hypothetical protein LOC100244517	-	2e+0	At4g29283	LCR21 (Low-molecular-weight cysteine-rich 21)	O.I.	H.G.	S.X.	Please select
0.71	89.5	0.96	1613965_at	CF210779	hypothetical protein LOC100267561	-	1e-18	At3g04740	SWP (STRUWWELPETER)	O.I.	H.G.	S.X.	Please select
0.63	84.3	0.96	1607533_at	CD801397	hypothetical protein LOC100263447	-	1e-5	At3g54670	TTN8 (TITAN8)	O.I.	H.G.	S.X.	Please select
0.42	60.1	0.96	1619646_at	CB341424	hypothetical protein LOC100261680	-	4e+0	At5g43960	nuclear transport factor 2 (NTF2) family protein / RNA recognition motif (RRM)-containing protein	O.I.	H.G.	S.X.	Please select
0.40	57.7	0.96	1607033_at	CD799937	hypothetical protein LOC100259729	-	4e-1	At3g30247	-	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
2.7	93.0	GSM436351	Seyval (SV, Seyve Villard 5-276) LD, 15h 3 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.3	90.7	GSM436404	V. riparia (VR, PI588259) LD, 15h 28 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.2	89.9	GSM147743	Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation	72
2.2	89.9	GSM436347	Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.1	89.1	GSM436428	V. riparia (VR, PI588259) SD, 13h 42 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.1	89.1	GSM436427	V. riparia (VR, PI588259) SD, 13h 42 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.1	89.1	GSM147730	Vitis aestivalis 'Norton ' mock inoculated at 24 h post inoculation	59
2.0	88.2	GSM322363	genotype: Chardonnay - disease type: Bois Noir infected - rep3	GSE12842	Gene expression in grapevine in response to Bois noir infection
2.0	88.2	GSM147742	Vitis aestivalis 'Norton ' mock inoculated at 24 h post inoculation	71
2.0	88.2	GSM436398	V. riparia (VR, PI588259) LD, 15h 14 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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