Co-expression analysis

Gene ID 1609172_at
Gene name hypothetical protein LOC100243607
Homology with ArabidopsisSimilar to At4g27410: RD26 (RESPONSIVE TO DESICCATION 26) (HF=3e-12)
Module size 11 genes
NF 0.34
%ile 48.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5879.80.901609172_atBQ792053hypothetical protein LOC100243607-3e-12At4g27410RD26 (RESPONSIVE TO DESICCATION 26)O.I.H.G.S.X.
0.4666.50.931619339_s_atCF215343ripening-related protein-like-3e+0At2g23780zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.3853.60.921615257_atCB972713hexose transporter-like-6e-12At4g35300TMT2 (TONOPLAST MONOSACCHARIDE TRANSPORTER2)O.I.H.G.S.X.
0.3446.80.921622333_atCD799818hypothetical protein LOC100264006-6e-25At2g47260WRKY23O.I.H.G.S.X.
0.3243.10.931615255_atCF405695--4e+0At5g3985040S ribosomal protein S9 (RPS9C)O.I.H.G.S.X.
0.3141.30.921614047_s_atCF512458hypothetical protein LOC100268134-1e-1At1g31300-O.I.H.G.S.X.
0.3141.30.931609303_atCB982393hypothetical protein LOC100266613-1e+0At4g20470unknown proteinO.I.H.G.S.X.
0.3141.30.941610428_atCD012983hypothetical protein LOC100263040-2e-4At1g32090early-responsive to dehydration protein-related / ERD protein-relatedO.I.H.G.S.X.
0.2428.70.921620347_atCA814065hypothetical protein LOC100245312-1e-13At3g10320transferase, transferring glycosyl groupsO.I.H.G.S.X.
0.2225.60.941607967_atCB009400hypothetical protein LOC100261140-4e-1At3g24860hydroxyproline-rich glycoprotein family proteinO.I.H.G.S.X.
0.1718.20.921619691_atCF211807hexose transporter-like-2e-17At1g20840TMT1 (TONOPLAST MONOSACCHARIDE TRANSPORTER1)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
4.497.3GSM436427V. riparia (VR, PI588259) SD, 13h 42 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
4.196.9GSM436429V. riparia (VR, PI588259) SD, 13h 42 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
3.696.0GSM436428V. riparia (VR, PI588259) SD, 13h 42 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
3.194.6GSM322367genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep1GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
2.491.3GSM436372Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.987.2GSM436348Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.886.0GSM436408V. riparia (VR, PI588259) LD, 15h 42 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.784.7GSM436406V. riparia (VR, PI588259) LD, 15h 42 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.784.7GSM147684Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation13Link to GEO
1.683.3GSM436413V. riparia (VR, PI588259) SD, 13h 3 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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