Co-expression analysis

Gene ID	1609171_at
Gene name	hypothetical protein LOC100251782
Homology with Arabidopsis	Similar to At1g07530: SCL14 (SCARECROW-LIKE 14) (HF=2e-2)
Module size	6 genes
NF	0.70
%ile	94.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.8	0.94	1609171_at	CA813062	hypothetical protein LOC100251782	-	2e-2	At1g07530	SCL14 (SCARECROW-LIKE 14)	O.I.	H.G.	S.X.	Please select
0.73	90.8	0.96	1622399_at	CF206628.1	similar to DNA-binding protein	-	2e-27	At4g31550	WRKY11	O.I.	H.G.	S.X.	Please select
0.73	90.8	0.96	1619985_at	CD004602	hypothetical protein LOC100262198	-	3e-1	At1g07530	SCL14 (SCARECROW-LIKE 14)	O.I.	H.G.	S.X.	Please select
0.57	79.8	0.93	1615012_s_at	CB341464	hypothetical protein LOC100251782	-	1e+0	At5g25360	unknown protein	O.I.	H.G.	S.X.	Please select
0.53	75.2	0.94	1610064_at	CB341653	similar to DNA-binding protein	-	3e-19	At2g38470	WRKY33	O.I.	H.G.	S.X.	Please select
0.53	75.2	0.95	1611285_s_at	CA809190	similar to DNA-binding protein	-	3e-22	At4g31550	WRKY11	O.I.	H.G.	S.X.	Please select

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Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
2.5	91.9	GSM436409	V. riparia (VR, PI588259) SD, 13h 1 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.3	90.7	GSM436389	V. riparia (VR, PI588259) LD, 15h 1 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.2	89.9	GSM147743	Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation	72
2.1	89.1	GSM436387	Seyval (SV, Seyve Villard 5-276) SD, 13h 42 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.1	89.1	GSM436414	V. riparia (VR, PI588259) SD, 13h 3 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
1.8	86.0	GSM436393	V. riparia (VR, PI588259) LD, 15h 3 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
1.8	86.0	GSM436403	V. riparia (VR, PI588259) LD, 15h 28 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
1.7	84.7	GSM436351	Seyval (SV, Seyve Villard 5-276) LD, 15h 3 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
1.7	84.7	GSM436396	V. riparia (VR, PI588259) LD, 15h 7 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
1.7	84.7	GSM436395	V. riparia (VR, PI588259) LD, 15h 7 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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