Co-expression analysis

Gene ID	1609169_at
Gene name	hypothetical protein LOC100244801
Homology with Arabidopsis	Similar to At1g54215: proline-rich family protein (HF=6e-2)
Module size	20 genes
NF	0.48
%ile	72.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.69	88.3	0.97	1609169_at	CD801012	hypothetical protein LOC100244801	-	6e-2	At1g54215	proline-rich family protein	O.I.	H.G.	S.X.	Please select
0.68	88.0	0.98	1608447_at	CB913704	hypothetical protein LOC100244219	-	3e-1	At3g44620	protein tyrosine phosphatase	O.I.	H.G.	S.X.	Please select
0.67	87.9	0.98	1615741_at	BQ799861	hypothetical protein LOC100261621	-	7e-5	At2g44520	COX10 (cytochrome c oxidase 10)	O.I.	H.G.	S.X.	Please select
0.59	80.6	0.98	1619474_s_at	CF215820	hypothetical protein LOC100262863	-	3e-5	At5g56600	PRF3 (PROFILIN 3)	O.I.	H.G.	S.X.	Please select
0.58	79.8	0.98	1611694_at	CB972078	hypothetical protein LOC100258865	-	2e-24	At2g21410	VHA-A2 (VACUOLAR PROTON ATPASE A2)	O.I.	H.G.	S.X.	Please select
0.50	72.7	0.98	1607302_at	CB979286	hypothetical protein LOC100253518	-	6e-3	At2g38450	-	O.I.	H.G.	S.X.	Please select
0.50	72.7	0.98	1606730_at	CF403493	similar to N-acetylglucosaminyltransferase I	-	3e+0	At1g59670	ATGSTU15 (GLUTATHIONE S-TRANSFERASE TAU 15)	O.I.	H.G.	S.X.	Please select
0.48	68.8	0.98	1615020_at	CF215189	hypothetical protein LOC100255532	-	1e+0	At3g11250	60S acidic ribosomal protein P0 (RPP0C)	O.I.	H.G.	S.X.	Please select
0.47	67.7	0.98	1621935_at	CD802055	-	-	2e-136	At1g10430	PP2A-2	O.I.	H.G.	S.X.	Please select
0.46	66.5	0.98	1620395_s_at	CF214765	hypothetical protein LOC100263635	-	4e-94	At5g03290	isocitrate dehydrogenase, putative / NAD+ isocitrate dehydrogenase, putative	O.I.	H.G.	S.X.	Please select
0.46	66.5	0.98	1619947_at	BQ794365	hypothetical protein LOC100266603	-	5e-6	At3g05280	integral membrane Yip1 family protein	O.I.	H.G.	S.X.	Please select
0.46	66.5	0.98	1608787_at	CB971461	hypothetical protein LOC100262851	-	2e-102	At1g79210	20S proteasome alpha subunit B, putative	O.I.	H.G.	S.X.	Please select
0.44	64.1	0.98	1613951_at	CF404624	hypothetical protein LOC100242676	-	1e-13	At3g06350	MEE32 (MATERNAL EFFECT EMBRYO ARREST 32)	O.I.	H.G.	S.X.	Please select
0.44	64.1	0.98	1618954_at	CF404862	hypothetical protein LOC100256489	-	6e-6	At1g73970	unknown protein	O.I.	H.G.	S.X.	Please select
0.44	64.1	0.98	1618931_at	CB973378	hypothetical protein LOC100265402	-	2e-31	At3g09840	CDC48 (CELL DIVISION CYCLE 48)	O.I.	H.G.	S.X.	Please select
0.42	60.1	0.98	1617241_at	CD719816	hypothetical protein LOC100254322	-	5e+0	At5g48530	unknown protein	O.I.	H.G.	S.X.	Please select
0.36	50.7	0.98	1621447_s_at	CF404909	hypothetical protein LOC100261458	-	1e-85	At3g26340	20S proteasome beta subunit E, putative	O.I.	H.G.	S.X.	Please select
0.35	48.5	0.98	1611911_at	CF212492	hypothetical protein LOC100266461	-	1e-121	At5g08530	CI51 (51 kDa subunit of complex I)	O.I.	H.G.	S.X.	Please select
0.34	46.8	0.98	1617811_s_at	BQ794232	hypothetical protein LOC100254399	-	4e-14	At2g21870	unknown protein	O.I.	H.G.	S.X.	Please select
0.33	45.7	0.98	1611461_at	BQ792825	hypothetical protein LOC100246984	-	1e-37	At4g34700	complex 1 family protein / LVR family protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
2.4	91.3	GSM147720	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation	49
2.4	91.3	GSM147738	Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation	67
2.3	90.7	GSM147708	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation	37
2.3	90.7	GSM147721	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	50
2.2	89.9	GSM147743	Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation	72
2.1	89.1	GSM147726	Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation	55
2.1	89.1	GSM436391	V. riparia (VR, PI588259) LD, 15h 3 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.0	88.2	GSM147742	Vitis aestivalis 'Norton ' mock inoculated at 24 h post inoculation	71
2.0	88.2	GSM147722	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	51
1.9	87.2	GSM436409	V. riparia (VR, PI588259) SD, 13h 1 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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