Co-expression analysis

Gene ID	1609137_at
Gene name
Homology with Arabidopsis	Similar to At5g51110: 4-alpha-hydroxytetrahydrobiopterin dehydratase (HF=4e+0)
Module size	38 genes
NF	0.28
%ile	39.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.97	99.9	0.94	1609137_at	CB977893	-	-	4e+0	At5g51110	4-alpha-hydroxytetrahydrobiopterin dehydratase	O.I.	H.G.	S.X.	Please select
0.44	64.1	0.97	1621794_at	CA810917	hypothetical protein LOC100267906	-	4e-2	At5g14280	DNA-binding storekeeper protein-related	O.I.	H.G.	S.X.	Please select
0.43	61.5	0.97	1615026_at	CB971780	hypothetical protein LOC100260296	-	1e+0	At2g29125	RTFL2 (ROTUNDIFOLIA LIKE 2)	O.I.	H.G.	S.X.	Please select
0.42	60.1	0.97	1607775_at	CF403449	-	-	8e-1	At5g58710	ROC7	O.I.	H.G.	S.X.	Please select
0.42	60.1	0.96	1609998_at	CF514678	-	-	9e-1	At1g09812	unknown protein	O.I.	H.G.	S.X.	Please select
0.42	60.1	0.97	1620577_at	BQ800051	hypothetical protein LOC100262487	-	2e-10	At5g42950	GYF domain-containing protein	O.I.	H.G.	S.X.	Please select
0.41	58.7	0.96	1610717_at	CB001608	-	-	3e+0	At3g52980	RNA recognition motif (RRM)-containing protein	O.I.	H.G.	S.X.	Please select
0.41	58.7	0.97	1609938_at	CF515319	hypothetical protein LOC100267803	-	4e-6	At3g18640	zinc finger protein-related	O.I.	H.G.	S.X.	Please select
0.37	51.7	0.97	1619370_at	CD801943	hypothetical protein LOC100258635	-	9e-1	At4g24972	TPD1 (TAPETUM DETERMINANT 1)	O.I.	H.G.	S.X.	Please select
0.35	48.5	0.97	1607130_at	BQ797379	-	-	3e-1	At5g67270	ATEB1C (microtubule end binding protein 1)	O.I.	H.G.	S.X.	Please select
0.35	48.5	0.95	1607742_at	CB977754	-	-	3e-1	At3g49920	VDAC5 (VOLTAGE DEPENDENT ANION CHANNEL 5)	O.I.	H.G.	S.X.	Please select
0.34	46.8	0.98	1612390_at	CF514780	hypothetical protein LOC100255521	-	1e+0	At3g24750	unknown protein	O.I.	H.G.	S.X.	Please select
0.34	46.8	0.95	1617636_at	CF513931	-	-	4e+0	At5g46295	unknown protein	O.I.	H.G.	S.X.	Please select
0.33	45.7	0.96	1607349_at	CF516800	hypothetical protein LOC100263112	-	6e-2	At4g35530	phosphatidylinositolglycan-related	O.I.	H.G.	S.X.	Please select
0.32	43.1	0.97	1622847_a_at	CF403381	hypothetical protein LOC100251447	-	5e-9	At4g18380	F-box family protein	O.I.	H.G.	S.X.	Please select
0.31	41.3	0.97	1618016_at	CB350120	hypothetical protein LOC100247325	-	3e-1	At5g35740	glycosyl hydrolase family protein 17	O.I.	H.G.	S.X.	Please select
0.30	39.4	0.95	1607835_at	CB978785	similar to transducin family protein / WD-40 repeat family protein	-	1e+0	At3g49750	AtRLP44 (Receptor Like Protein 44)	O.I.	H.G.	S.X.	Please select
0.30	39.4	0.94	1607592_at	CA808967	-	-	5e-1	At3g27630	unknown protein	O.I.	H.G.	S.X.	Please select
0.29	37.7	0.93	1608301_at	CB347622	-	-	3e-1	At2g01580	unknown protein	O.I.	H.G.	S.X.	Please select
0.29	37.7	0.97	1611176_s_at	CB977882	hypothetical protein LOC100260975	-	4e+0	At5g59200	pentatricopeptide (PPR) repeat-containing protein	O.I.	H.G.	S.X.	Please select
0.27	34.0	0.97	1620389_at	CF405555	hypothetical protein LOC100252478	-	2e+0	At5g54360	zinc finger (C2H2 type) family protein-related	O.I.	H.G.	S.X.	Please select
0.25	30.5	0.98	1619708_at	CK138171.1	hypothetical protein LOC100256723	-	2e-36	At1g17730	VPS46.1 (VACUOLAR PROTEIN SORTING 46.1)	O.I.	H.G.	S.X.	Please select
0.25	30.5	0.97	1619024_at	CB919289	hypothetical protein LOC100240933	-	2e-5	At5g19000	ATBPM1 (BTB-POZ and MATH domain 1)	O.I.	H.G.	S.X.	Please select
0.25	30.5	0.97	1609041_at	CF207716	hypothetical protein LOC100264096	-	4e+0	At3g21338	unknown protein	O.I.	H.G.	S.X.	Please select
0.24	28.7	0.98	1609498_s_at	CD801050	hypothetical protein LOC100242198	-	4e+0	At5g52270	vesicle transport protein-related	O.I.	H.G.	S.X.	Please select
0.21	24.0	0.96	1616658_at	CD801940	-	-	6e+0	At5g01075	beta-galactosidase	O.I.	H.G.	S.X.	Please select
0.21	24.0	0.97	1621496_at	BQ796119	hypothetical LOC100256705	-	6e-1	At3g01950	unknown protein	O.I.	H.G.	S.X.	Please select
0.21	24.0	0.96	1609952_at	CB980120	hypothetical protein LOC100268071	-	3e-10	At5g63910	FCLY (FARNESYLCYSTEINE LYASE)	O.I.	H.G.	S.X.	Please select
0.21	24.0	0.97	1617880_at	CB921486	hypothetical protein LOC100242119	-	2e-2	At1g29410	PAI3 (phosphoribosylanthranilate isomerase 3)	O.I.	H.G.	S.X.	Please select
0.19	20.9	0.97	1606938_at	CD802354	hypothetical protein LOC100265256	-	4e-72	At1g52740	HTA9 (HISTONE H2A PROTEIN 9)	O.I.	H.G.	S.X.	Please select
0.19	20.9	0.98	1607178_at	CD801946	hypothetical protein LOC100259500	-	1e-40	At3g50000	CKA2 (CASEIN KINASE II, ALPHA CHAIN 2)	O.I.	H.G.	S.X.	Please select
0.18	19.4	0.96	1608685_at	BQ797451	hypothetical protein LOC100244012	-	2e+0	At3g03460	unknown protein	O.I.	H.G.	S.X.	Please select
0.17	18.2	0.96	1620036_at	CF405991	hypothetical protein LOC100253221	-	4e+0	At5g60830	AtbZIP70 (Arabidopsis thaliana basic leucine-zipper 70)	O.I.	H.G.	S.X.	Please select
0.17	18.2	0.97	1607696_at	CB009443	-	-	3e-6	At2g36480	zinc finger (C2H2-type) family protein	O.I.	H.G.	S.X.	Please select
0.16	16.7	0.98	1611640_at	BQ793863	hypothetical protein LOC100242037	-	4e-14	At4g24470	TIFY1	O.I.	H.G.	S.X.	Please select
0.16	16.7	0.95	1611393_at	CA816903	-	-	4e+0	At5g03440	unknown protein	O.I.	H.G.	S.X.	Please select
0.12	12.1	0.96	1616332_at	CF210511	hypothetical protein LOC100259445	-	2e-1	At4g27660	unknown protein	O.I.	H.G.	S.X.	Please select
0.11	11.3	0.98	1620494_at	CF414991	-	-	1e+0	At5g55190	RAN3 (RAN GTPASE 3)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
2.6	92.5	GSM147722	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	51
2.5	91.9	GSM147740	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	69
2.3	90.7	GSM147743	Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation	72
2.3	90.7	GSM147739	Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation	68
2.2	89.9	GSM147728	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	57
2.1	89.1	GSM147721	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	50
2.1	89.1	GSM147723	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	52
2.0	88.2	GSM147730	Vitis aestivalis 'Norton ' mock inoculated at 24 h post inoculation	59
1.9	87.2	GSM147742	Vitis aestivalis 'Norton ' mock inoculated at 24 h post inoculation	71
1.9	87.2	GSM147708	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation	37

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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