Co-expression analysis

Gene ID	1609125_at
Gene name	hypothetical protein LOC100250703
Homology with Arabidopsis	Similar to At4g15000: 60S ribosomal protein L27 (RPL27C) (HF=3e-10)
Module size	6 genes
NF	0.31
%ile	44.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.50	72.7	0.97	1609125_at	CF373253	hypothetical protein LOC100250703	-	3e-10	At4g15000	60S ribosomal protein L27 (RPL27C)	O.I.	H.G.	S.X.	Please select
0.46	66.5	0.98	1617864_at	BQ797843	hypothetical protein LOC100262824	-	4e-64	At5g39740	60S ribosomal protein L5 (RPL5B)	O.I.	H.G.	S.X.	Please select
0.44	64.1	0.98	1609318_at	CF516798	hypothetical protein LOC100250040	-	4e-47	At1g70600	structural constituent of ribosome	O.I.	H.G.	S.X.	Please select
0.23	27.5	0.98	1612626_at	CF211601	hypothetical protein LOC100265729	-	1e-47	At2g39390	60S ribosomal protein L35 (RPL35B)	O.I.	H.G.	S.X.	Please select
0.22	25.6	0.97	1621637_at	BQ794462	hypothetical protein LOC100266121	-	3e-36	At3g51800	ATG2	O.I.	H.G.	S.X.	Please select
0.14	14.4	0.98	1616916_a_at	CB346827	hypothetical protein LOC100251636	-	7e-27	At5g02450	60S ribosomal protein L36 (RPL36C)	O.I.	H.G.	S.X.	Please select

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Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
2.5	91.9	GSM147743	Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation	72
2.5	91.9	GSM147675	Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	4
2.3	90.7	GSM147722	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	51
2.0	88.2	GSM147741	Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation	70
1.8	86.0	GSM147720	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation	49
1.8	86.0	GSM147714	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation	43
1.7	84.7	GSM299455	C_ni_rep2	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
1.7	84.7	GSM299461	C_ni_rep1	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
1.7	84.7	GSM147725	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 48 h post inoculation	54
1.6	83.3	GSM147716	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	45

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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