Co-expression analysis

Gene ID 1609114_at
Gene name
Homology with ArabidopsisSimilar to At5g39581: unknown protein (HF=3e+0)
Module size 6 genes
NF 0.42
%ile 63.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.80.961609114_atCF201212.1--3e+0At5g39581unknown proteinO.I.H.G.S.X.
0.7390.80.971611129_s_atCB005644hypothetical protein LOC100261235-2e+0At2g06200AtGRF6 (GROWTH-REGULATING FACTOR 6)O.I.H.G.S.X.
0.6787.90.971615354_atCF210983--2e-11At2g20930-O.I.H.G.S.X.
0.5577.30.971611884_atCF569214.1--1e+0At4g29960unknown proteinO.I.H.G.S.X.
0.5577.30.971621749_x_atCF569214.1--1e+0At4g29960unknown proteinO.I.H.G.S.X.
0.1212.10.971612717_s_atCA814430hypothetical protein LOC100259033-1e+0At1g01225NC domain-containing protein-relatedO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
10.899.7GSM322368genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep2GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
3.996.6GSM322367genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep1GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
3.996.6GSM322362genotype: Chardonnay - disease type: Bois Noir infected - rep2GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
3.495.5GSM436414V. riparia (VR, PI588259) SD, 13h 3 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.793.0GSM322361genotype: Chardonnay - disease type: Bois Noir infected - rep1GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
2.692.5GSM147717Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation46Link to GEO
2.692.5GSM147740Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation69Link to GEO
2.692.5GSM147711Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation40Link to GEO
2.591.9GSM147742Vitis aestivalis 'Norton ' mock inoculated at 24 h post inoculation71Link to GEO
2.591.9GSM147727Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation56Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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