Co-expression analysis

Gene ID 1609113_s_at
Gene name hypothetical protein LOC100266637
Homology with ArabidopsisSimilar to At1g71780: unknown protein (HF=3e-2)
Module size 9 genes
NF 0.62
%ile 89.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5779.80.951609113_s_atBQ800383hypothetical protein LOC100266637-3e-2At1g71780unknown proteinO.I.H.G.S.X.
0.7892.60.951619478_atCD004753hypothetical protein LOC100247440-3e-9At5g12010unknown proteinO.I.H.G.S.X.
0.7189.50.951606679_atCB036068hypothetical protein LOC100246740-1e-7At4g08260protein phosphatase 2C, putative / PP2C, putativeO.I.H.G.S.X.
0.7189.50.951620416_atCB342271hypothetical protein LOC100245041-3e-1At2g04890SCL21 (SCARECROW-LIKE 21)O.I.H.G.S.X.
0.6484.70.931621270_atCB971990hypothetical protein LOC100252531-4e-4At5g11590TINY2 (TINY2)O.I.H.G.S.X.
0.5879.80.951614505_s_atCB975513similar to At1g61340-2e-3At1g61340F-box family proteinO.I.H.G.S.X.
0.5375.20.951608966_atCB982651hypothetical protein LOC100256404-2e-4At5g59550zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.4666.50.951609190_atBQ798327hypothetical protein LOC100253381-6e+0At3g23180-O.I.H.G.S.X.
0.4464.10.951615403_atCD798952hypothetical protein LOC100255828-2e-1At1g35537-O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
4.096.7GSM147721Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation50Link to GEO
3.194.6GSM436394V. riparia (VR, PI588259) LD, 15h 7 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
3.094.2GSM436364Seyval (SV, Seyve Villard 5-276) LD, 15h 42 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.793.0GSM436355Seyval (SV, Seyve Villard 5-276) LD, 15h 14 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.591.9GSM436425V. riparia (VR, PI588259) SD, 13h 28 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.591.9GSM147722Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation51Link to GEO
2.591.9GSM436357Seyval (SV, Seyve Villard 5-276) LD, 15h 14 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.491.3GSM147734Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation63Link to GEO
2.491.3GSM147729Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation58Link to GEO
2.289.9GSM147715Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation44Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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