Co-expression analysis

Gene ID	1609113_s_at
Gene name	hypothetical protein LOC100266637
Homology with Arabidopsis	Similar to At1g71780: unknown protein (HF=3e-2)
Module size	9 genes
NF	0.62
%ile	89.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.57	79.8	0.95	1609113_s_at	BQ800383	hypothetical protein LOC100266637	-	3e-2	At1g71780	unknown protein	O.I.	H.G.	S.X.	Please select
0.78	92.6	0.95	1619478_at	CD004753	hypothetical protein LOC100247440	-	3e-9	At5g12010	unknown protein	O.I.	H.G.	S.X.	Please select
0.71	89.5	0.95	1606679_at	CB036068	hypothetical protein LOC100246740	-	1e-7	At4g08260	protein phosphatase 2C, putative / PP2C, putative	O.I.	H.G.	S.X.	Please select
0.71	89.5	0.95	1620416_at	CB342271	hypothetical protein LOC100245041	-	3e-1	At2g04890	SCL21 (SCARECROW-LIKE 21)	O.I.	H.G.	S.X.	Please select
0.64	84.7	0.93	1621270_at	CB971990	hypothetical protein LOC100252531	-	4e-4	At5g11590	TINY2 (TINY2)	O.I.	H.G.	S.X.	Please select
0.58	79.8	0.95	1614505_s_at	CB975513	similar to At1g61340	-	2e-3	At1g61340	F-box family protein	O.I.	H.G.	S.X.	Please select
0.53	75.2	0.95	1608966_at	CB982651	hypothetical protein LOC100256404	-	2e-4	At5g59550	zinc finger (C3HC4-type RING finger) family protein	O.I.	H.G.	S.X.	Please select
0.46	66.5	0.95	1609190_at	BQ798327	hypothetical protein LOC100253381	-	6e+0	At3g23180	-	O.I.	H.G.	S.X.	Please select
0.44	64.1	0.95	1615403_at	CD798952	hypothetical protein LOC100255828	-	2e-1	At1g35537	-	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
4.0	96.7	GSM147721	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	50
3.1	94.6	GSM436394	V. riparia (VR, PI588259) LD, 15h 7 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
3.0	94.2	GSM436364	Seyval (SV, Seyve Villard 5-276) LD, 15h 42 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.7	93.0	GSM436355	Seyval (SV, Seyve Villard 5-276) LD, 15h 14 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.5	91.9	GSM436425	V. riparia (VR, PI588259) SD, 13h 28 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.5	91.9	GSM147722	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	51
2.5	91.9	GSM436357	Seyval (SV, Seyve Villard 5-276) LD, 15h 14 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.4	91.3	GSM147734	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	63
2.4	91.3	GSM147729	Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation	58
2.2	89.9	GSM147715	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	44

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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