Co-expression analysis

Gene ID	1609106_at
Gene name
Homology with Arabidopsis	Similar to At1g07290: nucleotide-sugar transmembrane transporter (HF=6e-6)
Module size	8 genes
NF	0.23
%ile	32.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.93	99.2	0.83	1609106_at	CD006725	-	-	6e-6	At1g07290	nucleotide-sugar transmembrane transporter	O.I.	H.G.	S.X.	Please select
0.43	61.5	0.92	1621341_at	CA814621	-	-	2e+0	At5g42020	BIP2	O.I.	H.G.	S.X.	Please select
0.36	50.7	0.95	1610212_at	CF203864.1	-	-	1e+0	At5g13090	unknown protein	O.I.	H.G.	S.X.	Please select
0.32	43.1	0.95	1614246_at	CF202512.1	-	-	3e-4	At1g23480	ATCSLA03 (CELLULOSE SYNTHASE-LIKE A3)	O.I.	H.G.	S.X.	Please select
0.25	30.5	0.94	1616430_at	CA810723	-	-	2e-7	At5g38410	ribulose bisphosphate carboxylase small chain 3B / RuBisCO small subunit 3B (RBCS-3B) (ATS3B)	O.I.	H.G.	S.X.	Please select
0.13	13.3	0.95	1610687_at	CF511229	-	-	1e-35	At2g37680	-	O.I.	H.G.	S.X.	Please select
0.12	12.1	0.95	1620678_at	CB837115	-	-	4e-13	At4g01690	PPOX	O.I.	H.G.	S.X.	Please select
0.09	9.4	0.94	1617776_at	CF512941	-	-	1e+0	At5g23440	FTRA1 (ferredoxin/thioredoxin reductase subunit A (variable subunit) 1)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
3.2	94.9	GSM147733	Vitis aestivalis 'Norton ' mock inoculateds at 4 h post inoculation	62
2.8	93.4	GSM436389	V. riparia (VR, PI588259) LD, 15h 1 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.7	93.0	GSM147742	Vitis aestivalis 'Norton ' mock inoculated at 24 h post inoculation	71
2.7	93.0	GSM147723	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	52
2.3	90.7	GSM147739	Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation	68
2.2	89.9	GSM147720	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation	49
2.2	89.9	GSM436346	Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.1	89.1	GSM147735	Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation	64
2.1	89.1	GSM147717	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	46
2.0	88.2	GSM147721	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	50

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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