Co-expression analysis

Gene ID 1609106_at
Gene name
Homology with ArabidopsisSimilar to At1g07290: nucleotide-sugar transmembrane transporter (HF=6e-6)
Module size 8 genes
NF 0.23
%ile 32.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9399.20.831609106_atCD006725--6e-6At1g07290nucleotide-sugar transmembrane transporterO.I.H.G.S.X.
0.4361.50.921621341_atCA814621--2e+0At5g42020BIP2O.I.H.G.S.X.
0.3650.70.951610212_atCF203864.1--1e+0At5g13090unknown proteinO.I.H.G.S.X.
0.3243.10.951614246_atCF202512.1--3e-4At1g23480ATCSLA03 (CELLULOSE SYNTHASE-LIKE A3)O.I.H.G.S.X.
0.2530.50.941616430_atCA810723--2e-7At5g38410ribulose bisphosphate carboxylase small chain 3B / RuBisCO small subunit 3B (RBCS-3B) (ATS3B)O.I.H.G.S.X.
0.1313.30.951610687_atCF511229--1e-35At2g37680-O.I.H.G.S.X.
0.1212.10.951620678_atCB837115--4e-13At4g01690PPOXO.I.H.G.S.X.
0.099.40.941617776_atCF512941--1e+0At5g23440FTRA1 (ferredoxin/thioredoxin reductase subunit A (variable subunit) 1)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.294.9GSM147733Vitis aestivalis 'Norton ' mock inoculateds at 4 h post inoculation62Link to GEO
2.893.4GSM436389V. riparia (VR, PI588259) LD, 15h 1 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.793.0GSM147742Vitis aestivalis 'Norton ' mock inoculated at 24 h post inoculation71Link to GEO
2.793.0GSM147723Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation52Link to GEO
2.390.7GSM147739Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation68Link to GEO
2.289.9GSM147720Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation49Link to GEO
2.289.9GSM436346Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.189.1GSM147735Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation64Link to GEO
2.189.1GSM147717Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation46Link to GEO
2.088.2GSM147721Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation50Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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