Co-expression analysis

Gene ID	1609046_at
Gene name	hypothetical protein LOC100256085
Homology with Arabidopsis	Similar to At2g45650: AGL6 (AGAMOUS-LIKE 6) (HF=1e-13)
Module size	6 genes
NF	0.01
%ile	1.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.8	0.73	1609046_at	CB971729	hypothetical protein LOC100256085	-	1e-13	At2g45650	AGL6 (AGAMOUS-LIKE 6)	O.I.	H.G.	S.X.	Please select
0.04	5.2	0.91	1612269_at	CB345885	hypothetical protein LOC100259377	-	2e-12	At4g33000	CBL10 (CALCINEURIN B-LIKE 10)	O.I.	H.G.	S.X.	Please select
0.02	3.2	0.92	1614727_at	CF203545.1	-	-	5e-13	At1g36050	unknown protein	O.I.	H.G.	S.X.	Please select
-	0.5	0.93	1608850_s_at	BQ800000	hypothetical protein LOC100262029	-	1e+0	At5g44690	unknown protein	O.I.	H.G.	S.X.	Please select
-	0.5	0.94	1618223_at	CF609799	hypothetical protein LOC100252225	-	2e-24	At4g31080	unknown protein	O.I.	H.G.	S.X.	Please select
-	0.5	0.80	1610026_at	CF514136	-	-	2e-25	At4g31600	UDP-glucuronic acid/UDP-N-acetylgalactosamine transporter-related	O.I.	H.G.	S.X.	Please select

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Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
4.5	97.5	GSM147726	Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation	55
3.2	94.9	GSM147723	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	52
2.9	93.8	GSM147720	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation	49
2.9	93.8	GSM147728	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	57
2.9	93.8	GSM436346	Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.8	93.4	GSM322369	genotype: Incrocio Manzoni - disease type: Healthy - rep1	GSE12842	Gene expression in grapevine in response to Bois noir infection
2.7	93.0	GSM436419	V. riparia (VR, PI588259) SD, 13h 14 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.7	93.0	GSM436389	V. riparia (VR, PI588259) LD, 15h 1 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.5	91.9	GSM436413	V. riparia (VR, PI588259) SD, 13h 3 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.4	91.3	GSM436425	V. riparia (VR, PI588259) SD, 13h 28 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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