Co-expression analysis

Gene ID 1608968_at
Gene name hypothetical protein LOC100251348
Homology with ArabidopsisSimilar to At2g39020: GCN5-related N-acetyltransferase (GNAT) family protein (HF=7e-22)
Module size 8 genes
NF 0.51
%ile 76.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5072.70.961608968_atCB342367hypothetical protein LOC100251348-7e-22At2g39020GCN5-related N-acetyltransferase (GNAT) family proteinO.I.H.G.S.X.
0.6787.90.981615976_atCF517016hypothetical protein LOC100247651-2e-113At2g33150PKT3 (PEROXISOMAL 3-KETOACYL-COA THIOLASE 3)O.I.H.G.S.X.
0.5980.60.981616871_atCF404278hypothetical protein LOC100253007 /// similar to putative dihydrolipoamide succinyltransferase-3e-26At4g269102-oxoacid dehydrogenase family proteinO.I.H.G.S.X.
0.5779.80.981620143_atBQ794466hypothetical protein LOC100248167-1e+0At4g03290calcium-binding protein, putativeO.I.H.G.S.X.
0.5577.30.981611449_atCD797700hypothetical protein LOC100251803-6e-9At5g47710C2 domain-containing proteinO.I.H.G.S.X.
0.4767.70.981613235_atCF512455hypothetical protein LOC100260767-1e-20At1g17080unknown proteinO.I.H.G.S.X.
0.4057.70.981614591_atCF216033hypothetical protein LOC100254924-7e-19At1g03900ATNAP4 (Arabidopsis thaliana non-intrinsic ABC protein 4)O.I.H.G.S.X.
0.3345.70.981610475_atCB979928hypothetical protein LOC100242577-1e-7At4g20380zinc finger protein (LSD1)O.I.H.G.S.X.

Click More genes

Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.896.4GSM436358Seyval (SV, Seyve Villard 5-276) LD, 15h 21 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
3.395.2GSM147708Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation37Link to GEO
3.294.9GSM147722Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation51Link to GEO
2.893.4GSM436425V. riparia (VR, PI588259) SD, 13h 28 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.692.5GSM147726Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation55Link to GEO
2.591.9GSM147728Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation57Link to GEO
2.591.9GSM322365genotype: Chardonnay - disease type: Healthy - rep2GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
2.591.9GSM147710Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation39Link to GEO
2.591.9GSM147720Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation49Link to GEO
2.491.3GSM299459D_i_rep1GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

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