Co-expression analysis

Gene ID 1608966_at
Gene name hypothetical protein LOC100256404
Homology with ArabidopsisSimilar to At5g59550: zinc finger (C3HC4-type RING finger) family protein (HF=2e-4)
Module size 6 genes
NF 0.70
%ile 94.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.80.971608966_atCB982651hypothetical protein LOC100256404-2e-4At5g59550zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.6787.90.961616198_atCF405950hypothetical protein LOC100242144-1e-7At1g28370ERF11 (ERF DOMAIN PROTEIN 11)O.I.H.G.S.X.
0.6081.90.951612968_atCF513560hypothetical protein LOC100258721-1e+0At1g80700unknown proteinO.I.H.G.S.X.
0.6081.90.961608256_atCF404926hypothetical protein LOC100265659-3e-2At5g23680sterile alpha motif (SAM) domain-containing proteinO.I.H.G.S.X.
0.5577.30.951614505_s_atCB975513similar to At1g61340-2e-3At1g61340F-box family proteinO.I.H.G.S.X.
0.5375.20.951609190_atBQ798327hypothetical protein LOC100253381-6e+0At3g23180-O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
4.597.5GSM147734Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation63Link to GEO
4.597.5GSM436394V. riparia (VR, PI588259) LD, 15h 7 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
4.096.7GSM436355Seyval (SV, Seyve Villard 5-276) LD, 15h 14 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
3.896.4GSM147721Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation50Link to GEO
2.793.0GSM436425V. riparia (VR, PI588259) SD, 13h 28 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.793.0GSM147711Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation40Link to GEO
2.692.5GSM147710Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation39Link to GEO
2.591.9GSM436357Seyval (SV, Seyve Villard 5-276) LD, 15h 14 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.591.9GSM436351Seyval (SV, Seyve Villard 5-276) LD, 15h 3 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.491.3GSM436364Seyval (SV, Seyve Villard 5-276) LD, 15h 42 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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