Co-expression analysis

Gene ID	1608950_at
Gene name	hypothetical protein LOC100251050
Homology with Arabidopsis	Similar to At5g19200: short-chain dehydrogenase/reductase (SDR) family protein (HF=1e-6)
Module size	6 genes
NF	0.62
%ile	89.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.67	87.9	0.97	1608950_at	CF606755	hypothetical protein LOC100251050	-	1e-6	At5g19200	short-chain dehydrogenase/reductase (SDR) family protein	O.I.	H.G.	S.X.	Please select
0.67	87.9	0.98	1606778_at	CF607072	hypothetical protein LOC100261953	-	6e-30	At3g56740	ubiquitin-associated (UBA)/TS-N domain-containing protein	O.I.	H.G.	S.X.	Please select
0.67	87.9	0.98	1608277_at	CA816391	hypothetical protein LOC100249980	-	3e-75	At4g12230	esterase/lipase/thioesterase family protein	O.I.	H.G.	S.X.	Please select
0.53	75.2	0.97	1608708_at	CF211873	hypothetical protein LOC100255983	-	2e-9	At4g29680	type I phosphodiesterase/nucleotide pyrophosphatase family protein	O.I.	H.G.	S.X.	Please select
0.50	72.7	0.98	1606487_at	CD720110	hypothetical protein LOC100265402	-	2e-132	At5g03340	cell division cycle protein 48, putative / CDC48, putative	O.I.	H.G.	S.X.	Please select
0.40	57.7	0.98	1622567_at	CF516028	hypothetical protein LOC100266603	-	2e-20	At5g27490	integral membrane Yip1 family protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
6.2	98.8	GSM322368	genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep2	GSE12842	Gene expression in grapevine in response to Bois noir infection
4.6	97.6	GSM322361	genotype: Chardonnay - disease type: Bois Noir infected - rep1	GSE12842	Gene expression in grapevine in response to Bois noir infection
3.6	96.0	GSM322364	genotype: Chardonnay - disease type: Healthy - rep1	GSE12842	Gene expression in grapevine in response to Bois noir infection
3.1	94.6	GSM322370	genotype: Incrocio Manzoni - disease type: Healthy - rep2	GSE12842	Gene expression in grapevine in response to Bois noir infection
3.1	94.6	GSM436409	V. riparia (VR, PI588259) SD, 13h 1 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
3.0	94.2	GSM322367	genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep1	GSE12842	Gene expression in grapevine in response to Bois noir infection
2.8	93.4	GSM287873	Green hard berry B9 from plant 2 cluster proximal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
2.8	93.4	GSM322366	genotype: Chardonnay - disease type: Healthy - rep3	GSE12842	Gene expression in grapevine in response to Bois noir infection
2.4	91.3	GSM322369	genotype: Incrocio Manzoni - disease type: Healthy - rep1	GSE12842	Gene expression in grapevine in response to Bois noir infection
2.3	90.7	GSM322363	genotype: Chardonnay - disease type: Bois Noir infected - rep3	GSE12842	Gene expression in grapevine in response to Bois noir infection

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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