Co-expression analysis

Gene ID 1608945_at
Gene name hypothetical protein LOC100263523
Homology with ArabidopsisSimilar to At4g14130: XTR7 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 7) (HF=5e-32)
Module size 6 genes
NF 0.05
%ile 11.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5375.20.751608945_atBQ793580hypothetical protein LOC100263523-5e-32At4g14130XTR7 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 7)O.I.H.G.S.X.
0.4464.10.781621989_atCD006576--3e-21At4g19230CYP707A1O.I.H.G.S.X.
0.4057.70.761620258_atAY427195.1--2e-2At1g14370APK2A (PROTEIN KINASE 2A)O.I.H.G.S.X.
0.045.20.751610605_atCF372576--7e-1At3g51200auxin-responsive family proteinO.I.H.G.S.X.
0.023.20.761608231_atCB979713--1e+0At4g02620vacuolar ATPase subunit F family proteinO.I.H.G.S.X.
0.023.20.781620074_atCD713563hypothetical protein LOC100244152-2e-39At3g22930calmodulin, putativeO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
9.899.6GSM436357Seyval (SV, Seyve Villard 5-276) LD, 15h 14 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
3.495.5GSM147725Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 48 h post inoculation54Link to GEO
3.395.2GSM147743Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation72Link to GEO
3.094.2GSM147724Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 24 h post inoculation53Link to GEO
2.591.9GSM147742Vitis aestivalis 'Norton ' mock inoculated at 24 h post inoculation71Link to GEO
2.390.7GSM147731Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation60Link to GEO
2.390.7GSM147736Vitis aestivalis 'Norton ' mock inoculated at 24 h post inoculation65Link to GEO
2.390.7GSM147719Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 48 h post inoculation48Link to GEO
2.289.9GSM147708Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation37Link to GEO
2.289.9GSM147739Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation68Link to GEO

Inter-species module comparison

A co-expression module including the maize gene, Zm.8890.1.S1_a_at, orthologous to the query gene, 1608945_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.7490.3Zm.8890.1.S1_a_atAt4g14130hypothetical protein LOC100191584-1e-8At4g25820XTR9 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 9)O.I.H.G.S.X.
0.7389.9Zm.4377.2.A1_a_atAt4g14130hypothetical protein LOC100193789 /// ubiquitin-conjugating enzyme E2 J2-2e-4At1g17280UBC34 (ubiquitin-conjugating enzyme 34)O.I.H.G.S.X.
0.7087.0Zm.6558.1.S1_atAt4g14130eukaryotic initiation factor3-1e-10At4g11420EIF3A (EUKARYOTIC TRANSLATION INITIATION FACTOR 3A)O.I.H.G.S.X.
0.6582.1Zm.2157.7.S1_atAt4g14130ribosomal protein S11-1e-38At4g3080040S ribosomal protein S11 (RPS11B)O.I.H.G.S.X.
0.6481.7Zm.12526.1.S1_atAt4g14130--3e+0At1g58150unknown proteinO.I.H.G.S.X.
0.6481.7Zm.10174.1.A1_atAt4g14130--4e+0At2g47370-O.I.H.G.S.X.
0.6179.5Zm.2157.8.S1_atAt4g14130Hypothetical protein LOC100193584-8e-1At3g66654peptidyl-prolyl cis-trans isomerase cyclophilin-type family proteinO.I.H.G.S.X.
0.5775.1Zm.12150.2.S1_atAt4g14130hypothetical protein LOC100273319-9e-1At4g31340myosin heavy chain-relatedO.I.H.G.S.X.
0.5469.8Zm.6180.1.S1_atAt4g14130hypothetical protein LOC100277615-1e-5At4g10430-O.I.H.G.S.X.
0.5369.1Zm.5592.1.S1_atAt4g14130--9e-2At5g66052unknown proteinO.I.H.G.S.X.
0.5267.3Zm.6560.1.S1_atAt4g14130phospholipid synthesis1-8e-35At3g57650LPAT2O.I.H.G.S.X.
0.5267.3Zm.3657.1.A1_s_atAt4g14130--1e+0At5g42635glycine-rich proteinO.I.H.G.S.X.
0.5267.3Zm.155.2.S1_atAt4g14130--4e-3At4g32400SHS1 (SODIUM HYPERSENSITIVE 1)O.I.H.G.S.X.
0.5065.7Zm.12244.1.A1_atAt4g14130--4e-8At2g37500arginine biosynthesis protein ArgJ familyO.I.H.G.S.X.
0.4961.9Zm.3303.2.A1_atAt4g14130lipoxygenase-3e+0At3g22400LOX5O.I.H.G.S.X.
0.4961.9Zm.14497.1.A1_atAt4g14130histone H2B-1e-26At1g07790HTB1O.I.H.G.S.X.
0.4759.9Zm.62.1.S1_atAt4g14130anthocyaninless2-6e+0At4g28050TET7 (TETRASPANIN7)O.I.H.G.S.X.
0.4455.7Zm.6103.3.S1_atAt4g14130--8e-1At1g21010unknown proteinO.I.H.G.S.X.
0.4149.7Zm.6916.1.S1_atAt4g14130hypothetical protein LOC100273981-9e-13At5g66750CHR1 (CHROMATIN REMODELING 1)O.I.H.G.S.X.
0.3131.6Zm.5305.1.A1_atAt4g14130ribonucleoprotein A-6e-4At2g3722029 kDa ribonucleoprotein, chloroplast, putative / RNA-binding protein cp29, putativeO.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum



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