Co-expression analysis

Gene ID 1608907_s_at
Gene name hypothetical protein LOC100260266
Homology with ArabidopsisSimilar to At1g60470: AtGolS4 (Arabidopsis thaliana galactinol synthase 4) (HF=1e-30)
Module size 6 genes
NF 0.49
%ile 73.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.80.921608907_s_atCA809004hypothetical protein LOC100260266-1e-30At1g60470AtGolS4 (Arabidopsis thaliana galactinol synthase 4)O.I.H.G.S.X.
0.6787.90.931617035_s_atCF205538.1hypothetical protein LOC100260266-1e-10At2g47180AtGolS1 (Arabidopsis thaliana galactinol synthase 1)O.I.H.G.S.X.
0.5072.70.931619733_atCB342943hypothetical protein LOC100243866-1e-7At2g15020unknown proteinO.I.H.G.S.X.
0.4666.50.921607468_atCA809097hypothetical protein LOC100261598-1e+0At5g59160TOPP2O.I.H.G.S.X.
0.1819.40.921610691_atCF211470hypothetical protein LOC100250451-1e-6At5g55570unknown proteinO.I.H.G.S.X.

Click More genes

Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
4.697.6GSM147727Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation56Link to GEO
3.194.6GSM147710Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation39Link to GEO
2.793.0GSM147699Vitis vinifera 'Cabernet sauvignon' mock inoculated at 12 h post inoculation28Link to GEO
2.692.5GSM147705Vitis vinifera 'Cabernet sauvignon' mock inoculated at 12 h post inoculation34Link to GEO
2.591.9GSM147690Vitis vinifera 'Cabernet sauvignon' mock inoculated at 0 h post inoculation19Link to GEO
2.491.3GSM147728Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation57Link to GEO
2.491.3GSM147711Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation40Link to GEO
2.390.7GSM147738Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation67Link to GEO
2.289.9GSM147739Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation68Link to GEO
2.289.9GSM436408V. riparia (VR, PI588259) LD, 15h 42 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Back to the CoP portal site

Back to the KAGIANA project homepage