Co-expression analysis

Gene ID 1608888_at
Gene name hypothetical protein LOC100258013
Homology with ArabidopsisSimilar to At4g25130: peptide methionine sulfoxide reductase, putative (HF=2e-13)
Module size 6 genes
NF 0.53
%ile 78.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5072.70.961608888_atCF208466hypothetical protein LOC100258013-2e-13At4g25130peptide methionine sulfoxide reductase, putativeO.I.H.G.S.X.
0.7792.30.971619593_atCF215832hypothetical protein LOC100255022-2e-11At3g17210HS1 (HEAT STABLE PROTEIN 1)O.I.H.G.S.X.
0.6787.90.961615282_s_atCB345099hypothetical protein LOC100261311-2e-21At3g16570RALFL23 (ralf-like 23)O.I.H.G.S.X.
0.4057.70.961616496_atCB975515--3e-5At4g23710VAG2O.I.H.G.S.X.
0.3650.70.971615628_atCB345697hypothetical protein LOC100244782-5e-1At4g10080unknown proteinO.I.H.G.S.X.
0.2937.70.971608991_atCA816013hypothetical protein LOC100255967-8e-11At1g67300hexose transporter, putativeO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
2.189.1GSM436428V. riparia (VR, PI588259) SD, 13h 42 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.987.2GSM436398V. riparia (VR, PI588259) LD, 15h 14 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.886.0GSM436429V. riparia (VR, PI588259) SD, 13h 42 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.886.0GSM436424V. riparia (VR, PI588259) SD, 13h 28 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.784.7GSM436427V. riparia (VR, PI588259) SD, 13h 42 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.784.7GSM436425V. riparia (VR, PI588259) SD, 13h 28 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.784.7GSM436410V. riparia (VR, PI588259) SD, 13h 1 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.683.3GSM436422V. riparia (VR, PI588259) SD, 13h 21 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.683.3GSM436426V. riparia (VR, PI588259) SD, 13h 28 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.683.3GSM436407V. riparia (VR, PI588259) LD, 15h 42 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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