Co-expression analysis

Gene ID 1608708_at
Gene name hypothetical protein LOC100255983
Homology with ArabidopsisSimilar to At4g29680: type I phosphodiesterase/nucleotide pyrophosphatase family protein (HF=2e-9)
Module size 8 genes
NF 0.52
%ile 77.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5980.60.971608708_atCF211873hypothetical protein LOC100255983-2e-9At4g29680type I phosphodiesterase/nucleotide pyrophosphatase family proteinO.I.H.G.S.X.
0.7189.50.981608277_atCA816391hypothetical protein LOC100249980-3e-75At4g12230esterase/lipase/thioesterase family proteinO.I.H.G.S.X.
0.6484.70.971606778_atCF607072hypothetical protein LOC100261953-6e-30At3g56740ubiquitin-associated (UBA)/TS-N domain-containing proteinO.I.H.G.S.X.
0.6384.30.971610578_atBG273711hypothetical protein LOC100247027-1e-13At3g53110LOS4 (LOW EXPRESSION OF OSMOTICALLY RESPONSIVE GENES 4)O.I.H.G.S.X.
0.4464.10.971622000_s_atCF604800hypothetical protein LOC100242169-1e+0At3g27329-O.I.H.G.S.X.
0.4361.50.981622567_atCF516028hypothetical protein LOC100266603-2e-20At5g27490integral membrane Yip1 family proteinO.I.H.G.S.X.
0.4260.10.971613321_atCF516415hypothetical protein LOC100244395-5e-49At5g550702-oxoacid dehydrogenase family proteinO.I.H.G.S.X.
0.3345.70.971607136_atCF605014hypothetical protein LOC100257366-4e-28At4g38630RPN10 (REGULATORY PARTICLE NON-ATPASE 10)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
4.397.2GSM322368genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep2GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
3.796.2GSM322361genotype: Chardonnay - disease type: Bois Noir infected - rep1GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
2.793.0GSM322364genotype: Chardonnay - disease type: Healthy - rep1GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
2.289.9GSM322370genotype: Incrocio Manzoni - disease type: Healthy - rep2GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
2.289.9GSM322366genotype: Chardonnay - disease type: Healthy - rep3GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
2.289.9GSM287873Green hard berry B9 from plant 2 cluster proximal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO
2.088.2GSM322365genotype: Chardonnay - disease type: Healthy - rep2GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
2.088.2GSM147743Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation72Link to GEO
1.987.2GSM322367genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep1GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
1.987.2GSM322369genotype: Incrocio Manzoni - disease type: Healthy - rep1GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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