Co-expression analysis

Gene ID 1608604_at
Gene name hypothetical protein LOC100260136
Homology with ArabidopsisSimilar to At3g05560: 60S ribosomal protein L22-2 (RPL22B) (HF=7e-24)
Module size 8 genes
NF 0.70
%ile 94.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5577.30.991608604_atBQ796866hypothetical protein LOC100260136-7e-24At3g0556060S ribosomal protein L22-2 (RPL22B)O.I.H.G.S.X.
0.7892.60.991617593_atCF215049hypothetical protein LOC100253716-7e-86At3g52590UBQ1 (UBIQUITIN EXTENSION PROTEIN 1)O.I.H.G.S.X.
0.7491.00.991617878_atCF510921hypothetical protein LOC100258943-3e-85At2g47110UBQ6O.I.H.G.S.X.
0.7189.50.991612743_atCB346946hypothetical protein LOC100257720-7e-43At4g2574040S ribosomal protein S10 (RPS10A)O.I.H.G.S.X.
0.7088.60.991618317_atCB972677hypothetical protein LOC100243000-3e-45At2g0522040S ribosomal protein S17 (RPS17B)O.I.H.G.S.X.
0.6787.90.991618719_atCF414912hypothetical protein LOC100258124-1e-71At3g46040RPS15AD (ribosomal protein S15A D)O.I.H.G.S.X.
0.6384.30.991610734_s_atBQ798102hypothetical protein LOC100249556-3e-5At4g0081060S acidic ribosomal protein P1 (RPP1B)O.I.H.G.S.X.
0.6081.90.991620700_atBQ799947hypothetical protein LOC100261522-4e-20At1g30230elongation factor 1-beta / EF-1-betaO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
4.297.1GSM322368genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep2GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
4.196.9GSM322370genotype: Incrocio Manzoni - disease type: Healthy - rep2GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
2.893.4GSM322363genotype: Chardonnay - disease type: Bois Noir infected - rep3GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
2.793.0GSM147717Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation46Link to GEO
2.591.9GSM322369genotype: Incrocio Manzoni - disease type: Healthy - rep1GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
2.289.9GSM322365genotype: Chardonnay - disease type: Healthy - rep2GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
1.987.2GSM147735Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation64Link to GEO
1.886.0GSM322366genotype: Chardonnay - disease type: Healthy - rep3GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
1.886.0GSM147743Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation72Link to GEO
1.886.0GSM287873Green hard berry B9 from plant 2 cluster proximal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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