Co-expression analysis

Gene ID 1608528_at
Gene name hypothetical protein LOC100263742
Homology with ArabidopsisSimilar to At1g03600: photosystem II family protein (HF=4e-4)
Module size 13 genes
NF 0.58
%ile 85.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6183.20.971608528_atCD798772hypothetical protein LOC100263742-4e-4At1g03600photosystem II family proteinO.I.H.G.S.X.
0.8594.90.981613642_atCB002851hypothetical protein LOC100244962-9e-18At1g08380PSAO (photosystem I subunit O)O.I.H.G.S.X.
0.8093.60.981617206_s_atCB340600hypothetical protein LOC100244962-8e-1At5g67600unknown proteinO.I.H.G.S.X.
0.7992.70.981611924_atCA817406hypothetical protein LOC100244683-2e-9At1g55670PSAG (PHOTOSYSTEM I SUBUNIT G)O.I.H.G.S.X.
0.7591.30.981608822_atCF211356hypothetical protein LOC100246732-8e-6At3g46780PTAC16 (PLASTID TRANSCRIPTIONALLY ACTIVE 16)O.I.H.G.S.X.
0.7491.00.981615822_atCF208321hypothetical protein LOC100260599-3e-92At5g54270LHCB3 (LIGHT-HARVESTING CHLOROPHYLL B-BINDING PROTEIN 3)O.I.H.G.S.X.
0.5879.80.981607516_atCB972913hypothetical protein LOC100260811-9e-22At5g66570PSBO1 (PS II OXYGEN-EVOLVING COMPLEX 1)O.I.H.G.S.X.
0.5779.80.981613266_atCA815997hypothetical protein LOC100250168-2e+0At3g16690nodulin MtN3 family proteinO.I.H.G.S.X.
0.5577.30.981607453_atCA814565hypothetical protein LOC100243309-6e-3At5g08050-O.I.H.G.S.X.
0.4666.50.981614409_atCA817387hypothetical protein LOC100266036-1e-72At3g61470LHCA2O.I.H.G.S.X.
0.4666.50.981614593_atCF511805hypothetical protein LOC100246457-2e-96At4g10340LHCB5 (LIGHT HARVESTING COMPLEX OF PHOTOSYSTEM II 5)O.I.H.G.S.X.
0.3751.70.981622715_s_atCA809281hypothetical protein LOC100246378-3e-68At1g12900GAPA-2 (GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE A SUBUNIT 2)O.I.H.G.S.X.
0.3345.70.981617428_atCB344473hypothetical protein LOC100259814-7e-57At1g42970GAPB (GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE B SUBUNIT)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
2.793.0GSM322370genotype: Incrocio Manzoni - disease type: Healthy - rep2GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
2.491.3GSM322368genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep2GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
2.289.9GSM322364genotype: Chardonnay - disease type: Healthy - rep1GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
2.189.1GSM322366genotype: Chardonnay - disease type: Healthy - rep3GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
2.189.1GSM299457C_i_rep2GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
2.088.2GSM322369genotype: Incrocio Manzoni - disease type: Healthy - rep1GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
1.987.2GSM147726Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation55Link to GEO
1.987.2GSM147722Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation51Link to GEO
1.886.0GSM322365genotype: Chardonnay - disease type: Healthy - rep2GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
1.886.0GSM436365Seyval (SV, Seyve Villard 5-276) LD, 15h 42 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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