Co-expression analysis

Gene ID 1608525_at
Gene name hypothetical protein LOC100248018
Homology with ArabidopsisSimilar to At4g15900: PRL1 (PLEIOTROPIC REGULATORY LOCUS 1) (HF=3e-12)
Module size 6 genes
NF 0.72
%ile 95.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6183.20.981608525_atCF415433hypothetical protein LOC100248018-3e-12At4g15900PRL1 (PLEIOTROPIC REGULATORY LOCUS 1)O.I.H.G.S.X.
0.9198.80.991617007_atBQ792400hypothetical protein LOC100267570-4e-31At1g80620ribosomal protein S15 family proteinO.I.H.G.S.X.
0.8394.60.981617995_a_atCF512103hypothetical protein LOC100242505 /// hypothetical protein LOC100262532-1e-13At3g11710ATKRS-1 (ARABIDOPSIS THALIANA LYSYL-TRNA SYNTHETASE 1)O.I.H.G.S.X.
0.8093.60.981614471_atBQ792249hypothetical protein LOC100245854-6e+0At5g26594ARR24 (Arabidopsis response regulator 24)O.I.H.G.S.X.
0.7189.50.981607932_atCF204349.1hypothetical protein LOC100250334-4e-13At1g75560zinc knuckle (CCHC-type) family proteinO.I.H.G.S.X.
0.3853.60.981611413_atCF607338hypothetical protein LOC100258668-4e-26At3g09840CDC48 (CELL DIVISION CYCLE 48)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
2.390.7GSM436367Seyval (SV, Seyve Villard 5-276) SD, 13h 1 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.390.7GSM147702Vitis vinifera 'Cabernet sauvignon' mock inoculated at 0 h post inoculation31Link to GEO
2.289.9GSM147675Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation4Link to GEO
2.189.1GSM147736Vitis aestivalis 'Norton ' mock inoculated at 24 h post inoculation65Link to GEO
2.088.2GSM147690Vitis vinifera 'Cabernet sauvignon' mock inoculated at 0 h post inoculation19Link to GEO
1.886.0GSM436351Seyval (SV, Seyve Villard 5-276) LD, 15h 3 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.886.0GSM147672Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation1Link to GEO
1.886.0GSM436396V. riparia (VR, PI588259) LD, 15h 7 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.784.7GSM147726Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation55Link to GEO
1.784.7GSM436369Seyval (SV, Seyve Villard 5-276) SD, 13h 1 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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