Co-expression analysis

Gene ID 1608502_at
Gene name hypothetical protein LOC100262732
Homology with ArabidopsisSimilar to At2g06050: OPR3 (OPDA-REDUCTASE 3) (HF=1e-3)
Module size 12 genes
NF 0.47
%ile 69.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7088.60.981608502_atBQ794120hypothetical protein LOC100262732-1e-3At2g06050OPR3 (OPDA-REDUCTASE 3)O.I.H.G.S.X.
0.6081.90.991620693_atCF513433--1e-12At2g22730transporter-relatedO.I.H.G.S.X.
0.5879.80.991617406_s_atCF415339hypothetical protein LOC100266010-2e-8At3g07220transcriptional activator, putativeO.I.H.G.S.X.
0.5375.20.991609424_atCD798745hypothetical protein LOC100263956-7e-30At3g13670protein kinase family proteinO.I.H.G.S.X.
0.5173.20.991608813_s_atBQ795140hypothetical protein LOC100255523-5e-84At1g78870UBC35 (UBIQUITIN-CONJUGATING ENZYME 35)O.I.H.G.S.X.
0.4868.80.991617655_atCB348593hypothetical protein LOC100262391-5e-10At3g16620ATTOC120O.I.H.G.S.X.
0.4767.70.991608653_atCB975644hypothetical protein LOC100263217-5e+0At4g15020DNA binding / protein dimerizationO.I.H.G.S.X.
0.4564.60.981620360_atCF208277hypothetical protein LOC100262741-2e-158At2g23070casein kinase II alpha chain, putativeO.I.H.G.S.X.
0.4260.10.991621779_s_atBQ794980hypothetical protein LOC100244148-6e-40At3g52560UEV1D-4 (UBIQUITIN E2 VARIANT 1D-4)O.I.H.G.S.X.
0.3345.70.991622424_atCA813635hypothetical protein LOC100265980-9e-11At5g44200CBP20 (CAP-BINDING PROTEIN 20)O.I.H.G.S.X.
0.2837.70.991616337_atCB914494hypothetical protein LOC100246803-1e-9At3g07170sterile alpha motif (SAM) domain-containing proteinO.I.H.G.S.X.
0.2632.00.991613582_atCF204478.1hypothetical protein LOC100261825-6e-12At5g14170CHC1O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
2.793.0GSM147727Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation56Link to GEO
2.793.0GSM436349Seyval (SV, Seyve Villard 5-276) LD, 15h 3 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.692.5GSM436351Seyval (SV, Seyve Villard 5-276) LD, 15h 3 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.591.9GSM147693Vitis vinifera 'Cabernet sauvignon' mock inoculated at 12 h post inoculation22Link to GEO
2.491.3GSM436391V. riparia (VR, PI588259) LD, 15h 3 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.390.7GSM436393V. riparia (VR, PI588259) LD, 15h 3 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.390.7GSM322361genotype: Chardonnay - disease type: Bois Noir infected - rep1GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
2.390.7GSM322363genotype: Chardonnay - disease type: Bois Noir infected - rep3GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
2.088.2GSM436413V. riparia (VR, PI588259) SD, 13h 3 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.886.0GSM147739Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation68Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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