Co-expression analysis

Gene ID	1608469_at
Gene name	hypothetical protein LOC100246886
Homology with Arabidopsis	Similar to At4g23910: unknown protein (HF=4e+0)
Module size	6 genes
NF	0.22
%ile	31.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.59	80.6	0.94	1608469_at	CF519012	hypothetical protein LOC100246886	-	4e+0	At4g23910	unknown protein	O.I.	H.G.	S.X.	Please select
0.50	72.7	0.94	1617229_s_at	CB975402	-	-	2e-1	At2g22520	unknown protein	O.I.	H.G.	S.X.	Please select
0.27	34.0	0.94	1620810_at	CF214559	-	-	2e+0	At4g09770	meprin and TRAF homology domain-containing protein / MATH domain-containing protein	O.I.	H.G.	S.X.	Please select
0.18	19.4	0.95	1606685_at	CB348042	-	-	5e-1	At2g15770	glycine-rich protein	O.I.	H.G.	S.X.	Please select
0.14	14.4	0.95	1607592_at	CA808967	-	-	5e-1	At3g27630	unknown protein	O.I.	H.G.	S.X.	Please select
0.07	7.8	0.94	1610383_at	CF203837.1	-	-	5e-19	At3g11410	PP2CA (ARABIDOPSIS THALIANA PROTEIN PHOSPHATASE 2CA)	O.I.	H.G.	S.X.	Please select

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Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
4.2	97.1	GSM436358	Seyval (SV, Seyve Villard 5-276) LD, 15h 21 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
3.5	95.7	GSM147722	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	51
2.8	93.4	GSM436380	Seyval (SV, Seyve Villard 5-276) SD, 13h 21 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.8	93.4	GSM147740	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	69
2.7	93.0	GSM147727	Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation	56
2.6	92.5	GSM147709	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	38
2.6	92.5	GSM147738	Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation	67
2.6	92.5	GSM436362	Seyval (SV, Seyve Villard 5-276) LD, 15h 28 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.5	91.9	GSM147728	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	57
2.5	91.9	GSM147710	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	39

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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