Co-expression analysis

Gene ID	1608451_at
Gene name
Homology with Arabidopsis	Similar to At3g25220: FKBP15-1 (HF=5e-22)
Module size	6 genes
NF	0.58
%ile	84.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.38	53.6	0.96	1608451_at	CF205526.1	-	-	5e-22	At3g25220	FKBP15-1	O.I.	H.G.	S.X.	Please select
0.73	90.8	0.96	1607300_at	CF206446.1	-	-	9e-51	At2g47650	UXS4 (UDP-XYLOSE SYNTHASE 4)	O.I.	H.G.	S.X.	Please select
0.67	87.9	0.98	1609341_s_at	CF202467.1	hypothetical protein LOC100265359	-	2e-3	At5g40630	ubiquitin family protein	O.I.	H.G.	S.X.	Please select
0.61	83.2	0.97	1618973_s_at	CF204369.1	hypothetical protein LOC100267103	-	1e+0	At3g61560	reticulon family protein (RTNLB6)	O.I.	H.G.	S.X.	Please select
0.60	81.9	0.97	1620264_x_at	CF201907.1	-	-	2e-1	At5g10860	CBS domain-containing protein	O.I.	H.G.	S.X.	Please select
0.44	64.1	0.96	1621187_s_at	CF201896.1	-	-	8e+0	At5g50345	-	O.I.	H.G.	S.X.	Please select

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Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
2.8	93.4	GSM147728	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	57
2.6	92.5	GSM147739	Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation	68
2.6	92.5	GSM436349	Seyval (SV, Seyve Villard 5-276) LD, 15h 3 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.2	89.9	GSM147729	Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation	58
2.1	89.1	GSM147727	Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation	56
2.0	88.2	GSM147711	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	40
1.9	87.2	GSM147723	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	52
1.9	87.2	GSM147716	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	45
1.8	86.0	GSM147742	Vitis aestivalis 'Norton ' mock inoculated at 24 h post inoculation	71
1.8	86.0	GSM147717	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	46

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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