Co-expression analysis

Gene ID 1608449_at
Gene name hypothetical protein LOC100247109
Homology with ArabidopsisSimilar to At1g19580: GAMMA CA1 (GAMMA CARBONIC ANHYDRASE 1) (HF=6e-72)
Module size 17 genes
NF 0.39
%ile 58.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5980.60.971608449_atCB349956hypothetical protein LOC100247109-6e-72At1g19580GAMMA CA1 (GAMMA CARBONIC ANHYDRASE 1)O.I.H.G.S.X.
0.5779.80.981608703_atCF510814ubiquitin-activating enzyme-1e-24At5g06460ATUBA2O.I.H.G.S.X.
0.5577.30.991615735_atCD797265hypothetical protein LOC100259271-0At1g50370serine/threonine protein phosphatase, putativeO.I.H.G.S.X.
0.4969.30.981622378_s_atCB974439hypothetical protein LOC100252146-5e-10At5g54855pollen Ole e 1 allergen and extensin family proteinO.I.H.G.S.X.
0.4767.70.981616861_s_atBQ792575hypothetical protein LOC100244246-9e-11At4g17720RNA recognition motif (RRM)-containing proteinO.I.H.G.S.X.
0.4464.10.981620906_s_atCB972641hypothetical protein LOC100246670-2e+0At1g32630unknown proteinO.I.H.G.S.X.
0.4158.70.981616941_atCD713937hypothetical protein LOC100248410-2e-39At1g07830ribosomal protein L29 family proteinO.I.H.G.S.X.
0.3954.90.981607275_atCF210833hypothetical protein LOC100261812-7e-13At3g15980coatomer protein complex, subunit beta 2 (beta prime), putativeO.I.H.G.S.X.
0.3548.50.991614840_atCF415070hypothetical protein LOC100248036-2e-56At1g10840TIF3H1O.I.H.G.S.X.
0.3345.70.981612039_atBQ799884hypothetical protein LOC100266651-1e-18At2g03870small nuclear ribonucleoprotein, putative / snRNP, putative / Sm protein, putativeO.I.H.G.S.X.
0.3141.30.981621991_atCB978460hypothetical protein LOC100243393-1e-1At2g41060RNA recognition motif (RRM)-containing proteinO.I.H.G.S.X.
0.3039.40.981614599_atCF513204hypothetical protein LOC100248579-1e-25At4g01810protein transport protein-relatedO.I.H.G.S.X.
0.3039.40.981618577_atCB969753hypothetical protein LOC100257605-5e-7At2g03290protein transmembrane transporterO.I.H.G.S.X.
0.2937.70.971614946_atCF510992hypothetical protein LOC100258219-8e-64At4g2482026S proteasome regulatory subunit, putative (RPN7)O.I.H.G.S.X.
0.2530.50.981610373_atCF517404hypothetical protein LOC100242638-1e-20At2g26210ankyrin repeat family proteinO.I.H.G.S.X.
0.2022.40.981617936_atBQ797736similar to 26S proteasome subunit RPN5b-3e-23At5g64760RPN5B (REGULATORY PARTICLE NON-ATPASE SUBUNIT 5B)O.I.H.G.S.X.
0.1920.90.98AFFX-Vvi-actin-5_atactin 1--O.I.H.G.S.X.

Click More genes

Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
2.692.5GSM299457C_i_rep2GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
2.088.2GSM147721Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation50Link to GEO
1.886.0GSM147734Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation63Link to GEO
1.784.7GSM147708Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation37Link to GEO
1.683.3GSM147740Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation69Link to GEO
1.683.3GSM436358Seyval (SV, Seyve Villard 5-276) LD, 15h 21 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.683.3GSM147717Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation46Link to GEO
1.581.7GSM147722Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation51Link to GEO
1.581.7GSM147741Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation70Link to GEO
1.581.7GSM147723Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation52Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

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