Co-expression analysis

Gene ID	1608418_at
Gene name
Homology with Arabidopsis	Similar to At5g50820: anac097 (Arabidopsis NAC domain containing protein 97) (HF=5e+0)
Module size	6 genes
NF	0.03
%ile	7.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.8	0.82	1608418_at	CB979002	-	-	5e+0	At5g50820	anac097 (Arabidopsis NAC domain containing protein 97)	O.I.	H.G.	S.X.	Please select
0.15	15.6	0.93	1611387_at	CD720256	-	-	1e+0	At1g11020	zinc finger (C3HC4-type RING finger) family protein	O.I.	H.G.	S.X.	Please select
0.07	7.8	0.91	1621864_at	CD714855	-	-	1e-6	At4g29430	rps15ae (ribosomal protein S15A E)	O.I.	H.G.	S.X.	Please select
0.05	6.0	0.93	1606857_at	CA818423	-	-	4e+0	At3g06330	zinc finger (C3HC4-type RING finger) family protein	O.I.	H.G.	S.X.	Please select
0.04	5.2	0.91	1622036_at	CB983151	-	-	6e+0	At2g45190	AFO (ABNORMAL FLORAL ORGANS)	O.I.	H.G.	S.X.	Please select
0.01	2.1	0.93	1620387_at	CD719602	hypothetical protein LOC100260954	-	2e-30	At5g07290	AML4 (ARABIDOPSIS MEI2-LIKE 4)	O.I.	H.G.	S.X.	Please select

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Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
5.3	98.2	GSM436370	Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
3.1	94.6	GSM436390	V. riparia (VR, PI588259) LD, 15h 1 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.9	93.8	GSM322366	genotype: Chardonnay - disease type: Healthy - rep3	GSE12842	Gene expression in grapevine in response to Bois noir infection
2.6	92.5	GSM287891	Pink soft berry B23 from plant 1 cluster proximal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
2.6	92.5	GSM436346	Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.6	92.5	GSM287893	Pink soft berry C12 from plant 1 cluster distal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
2.6	92.5	GSM147717	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	46
2.5	91.9	GSM147677	Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 48 h post inoculation	6
2.5	91.9	GSM287881	Green soft berry B10 from plant 1 cluster proximal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
2.4	91.3	GSM322361	genotype: Chardonnay - disease type: Bois Noir infected - rep1	GSE12842	Gene expression in grapevine in response to Bois noir infection

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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