Co-expression analysis

Gene ID	1608337_at
Gene name	hypothetical protein LOC100260571
Homology with Arabidopsis	Similar to At5g66110: metal ion binding (HF=2e-15)
Module size	6 genes
NF	0.03
%ile	7.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.48	68.8	0.91	1608337_at	BQ792532	hypothetical protein LOC100260571	-	2e-15	At5g66110	metal ion binding	O.I.	H.G.	S.X.	Please select
0.44	64.1	0.91	1610169_at	BQ797205	hypothetical protein LOC100250570	-	1e-4	At2g22570	NIC1 (NICOTINAMIDASE 1)	O.I.	H.G.	S.X.	Please select
0.04	5.2	0.91	1617802_at	BQ793493	hypothetical protein LOC100248493	-	9e-11	At2g07640	D2,D4-dienoyl-CoA reductase-related	O.I.	H.G.	S.X.	Please select
0.03	4.2	0.91	1622528_at	CF515653	hypothetical protein LOC100259834	-	1e-11	At4g12290	amine oxidase/ copper ion binding / quinone binding	O.I.	H.G.	S.X.	Please select
0.02	3.2	0.93	1610555_at	CF413935	-	-	2e-5	At5g63905	unknown protein	O.I.	H.G.	S.X.	Please select
0.01	2.1	0.92	1620722_at	CB977655	-	-	2e-1	At2g36895	unknown protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
3.7	96.2	GSM147721	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	50
3.3	95.2	GSM287901	Red soft berry C16 from plant 1 cluster distal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
3.1	94.6	GSM287900	Red soft berry C15 from plant 1 cluster distal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
3.1	94.6	GSM147720	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation	49
3.1	94.6	GSM287897	Red soft berry C29 from plant 2 cluster proximal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
2.8	93.4	GSM287903	Red soft berry A7 from plant 2 cluster distal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
2.7	93.0	GSM147710	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	39
2.6	92.5	GSM287899	Red soft berry C13 from plant 1 cluster proximal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
2.5	91.9	GSM287904	Red soft berry C31 from plant 2 cluster distal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
2.4	91.3	GSM147723	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	52

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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