Co-expression analysis

Gene ID	1608312_at
Gene name	hypothetical protein LOC100262024
Homology with Arabidopsis	Similar to At3g07880: Rho GDP-dissociation inhibitor family protein (HF=5e-18)
Module size	7 genes
NF	0.46
%ile	69.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.46	66.5	0.95	1608312_at	CA809526	hypothetical protein LOC100262024	-	5e-18	At3g07880	Rho GDP-dissociation inhibitor family protein	O.I.	H.G.	S.X.	Please select
0.53	75.2	0.96	1612469_at	CF205528.1	hypothetical protein LOC100248700	-	3e-5	At4g34190	SEP1 (STRESS ENHANCED PROTEIN 1)	O.I.	H.G.	S.X.	Please select
0.48	68.8	0.96	1620152_at	CD004112	hypothetical protein LOC100252793	-	4e-1	At2g28500	LBD11 (LOB DOMAIN-CONTAINING PROTEIN 11)	O.I.	H.G.	S.X.	Please select
0.44	64.1	0.96	1613337_x_at	CF204544.1	-	-	3e-1	At4g28703	-	O.I.	H.G.	S.X.	Please select
0.42	60.1	0.96	1614462_at	CB343121	-	-	4e-63	Atcg00300	-	O.I.	H.G.	S.X.	Please select
0.40	57.7	0.96	1620373_at	BQ793176	-	-	5e-6	At1g50320	ATHX	O.I.	H.G.	S.X.	Please select
0.37	51.7	0.96	1621345_x_at	CF204350.1	-	-	4e+0	At4g28703	-	O.I.	H.G.	S.X.	Please select

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Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
3.1	94.6	GSM147709	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	38
3.0	94.2	GSM147728	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	57
2.8	93.4	GSM147711	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	40
2.7	93.0	GSM436414	V. riparia (VR, PI588259) SD, 13h 3 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.6	92.5	GSM147710	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	39
2.6	92.5	GSM147712	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 24 h post inoculation	41
2.3	90.7	GSM147721	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	50
2.3	90.7	GSM147741	Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation	70
2.3	90.7	GSM147720	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation	49
2.3	90.7	GSM147739	Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation	68

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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